Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01135 ATGGCTGCTGCATCTGGCATGCCAGAGGAGGAGACAGCGATGTTTCCCGACAAAAGTGTCCATCCCAGGTTGGATGTCTACGTGTGGGACATGGATGAGACCCTTGTACTGCTCAACTCCTTGCTGAAATCATCATACGCTGAGGCTTTCAATGGTCTGAAGGATGTGCAGAAGGGGGTGGAAATCGGGAGGACATGGGAAAATCTCATTCTACAAATATGTGATGATTATTTCTTCTATGAACAAATTGAAAATTACAATAAGCCTTTTCTTGATGCTCTGGCCCAATATGATGATGGGAGGGACCTATCTGATTATGACTTCAACGAAGATGAATTAGTTTCCCCACATGATGATGCCAACAAAAGAAAACTGGCATATAGGCATCGAGTCATTGCCCAAAAGTACTTACAGGGTTTACGGAATATTTTAGATAATAAGACAATAAAACTTTGGGATGAATTGTATGATAAAACTGATGAATACACTGACAGGTGGCTTTCATCAGCACGGACCTTTTTGAAGGAGTGTTCGGGTGAAGATAAAGATGCAGTTTATTCTATTGCTTTTGCTAACACCAGCTCAAACTCAACTAATGCAAAGCATGTAAATGTTTTAGTGACATCTGGATCGTTAGTTCCCTCACTTGTGAAATGCATGCTCTTTCATCTGGACAGCTTAATAACGCATGGAAATGTTTATAGCTCATGGGAAGTGGGGAAAATTCAATGTTTCCGATGGATCAAGGAGCGTTTCAACCATCCCAATGTTCGCTTTTGTGTAATTGGAGATGGATGGGAAGAGTGTGAGGCTGCAGAAATCATGAGATGGCCATTTGTTAAGATTGATCCACGGCCTGGAAAACTTCACAGGTTCCCTGGTCTCACTTTGACAACAATTAGCCACTACTTTTCTGTCGTGTATGGAAGGCCGGACAACGAGAATGGTGAAGAATGA 957 0.4211 MAAASGMPEEETAMFPDKSVHPRLDVYVWDMDETLVLLNSLLKSSYAEAFNGLKDVQKGVEIGRTWENLILQICDDYFFYEQIENYNKPFLDALAQYDDGRDLSDYDFNEDELVSPHDDANKRKLAYRHRVIAQKYLQGLRNILDNKTIKLWDELYDKTDEYTDRWLSSARTFLKECSGEDKDAVYSIAFANTSSNSTNAKHVNVLVTSGSLVPSLVKCMLFHLDSLITHGNVYSSWEVGKIQCFRWIKERFNHPNVRFCVIGDGWEECEAAEIMRWPFVKIDPRPGKLHRFPGLTLTTISHYFSVVYGRPDNENGEE 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01135 318 Gene3D - 25 292 IPR038102 -
Gma05g01135 318 PANTHER EYES ABSENT 19 309 IPR028472 GO:0004725
Gma05g01135 318 SUPERFAMILY HAD-like 28 284 IPR036412 -
Gma05g01135 318 TIGRFAM EYA-cons_domain: EYA conserved domain 25 300 IPR006545 GO:0007275
Gma05g01135 318 PANTHER DEVELOPMENTAL PROTEIN EYES ABSENT 19 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01135 Gma-Chr5 32330815 32343321 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01135 24 318 Protein tyrosine phosphatase (PTP) family AT2G35320 59.661 7.69e-137 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01135 - K17620 gmx:100791661 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01135 05 32330815 32343321 Gma05g01135 05 32330815 32343321 ECH
Gma17g01414 17 13279165 13283520 Gma05g01135 05 32330815 32343321 GST