Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01126 ATGGAGGGTTGGCCAGGAAGAAGACAAGAGTGGGAACCACCCGCCGCAGCATCATCTCCCACTTGCCCATTCCTCCGCCCTCGTTTATCGAATTCTAATCAACTTAAGATCGCGTTGAGGTCACGCTCTTCGAACAGGAGTGAAGAACACATTTTCGCAAGAAGCGCGTCACGCTTTGTTCAGAATCTTCACTTACCGGACTTGCACTTGCAACAAAATTACCAGCAACCCCGGCACAAGCGCGATTCGGAGGAGCAAGAGACTCCTCCGAACCCGGGAACAGCGCTGGCGCCGTTCGACAACGATGATGACAAAAGCCAGGGCCTGGAGCTGGCTTCAGGCCCTGGGGACATCGTTGGACGGCGCCCACGCGGCAGACCTTCCGGGTCCAAGAACAAGCCGAAGCCACCGGTGATAATCACCCGGGAGAGCGCCAACACGCTGAGGGCGCACATTCTCGAGGTAGGAAGCGGCTCCGACGTCTTCGACTGTGTCACCGCTTATGCGCGGCGGCGCCAGCGCGGGATCTGCGTCCTCAGCGGCAGTGGTACCGTCACCAATGTCAGTCTCCGGCAGCCTGCGGCTGCCGGAGCCGTCGTCAGGCTGCACGGAAGGTTCGAGATTCTCTCTCTCTCCGGCTCGTTCCTCCCGCCGCCGGCTCCGCCGGGAGCCACCAGTCTCACAATCTACCTCGCCGGCGGGCAGGGCCAGGTCGTCGGAGGAAACGTCGTGGGAGAATTAACCGCGGCAGGGCCAGTAATCGTCATCGCAGCATCGTTCACCAACGTGGCTTACGAGAGGCTCCCCTTAGAAGAAGATGAACAACAACAACAACAGCTTCAGATTCAGTCACCCGCAACGACGTCATCTCAAGGAAACAACAACAATAACCCTTTCCCTGACCCTTCTTCAGGACTTCCCTTCTTCAACTTACCACTCAATATGCAGAATGTTCAGTTACCACCTTTTTGA 972 0.5761 MEGWPGRRQEWEPPAAASSPTCPFLRPRLSNSNQLKIALRSRSSNRSEEHIFARSASRFVQNLHLPDLHLQQNYQQPRHKRDSEEQETPPNPGTALAPFDNDDDKSQGLELASGPGDIVGRRPRGRPSGSKNKPKPPVIITRESANTLRAHILEVGSGSDVFDCVTAYARRRQRGICVLSGSGTVTNVSLRQPAAAGAVVRLHGRFEILSLSGSFLPPPAPPGATSLTIYLAGGQGQVVGGNVVGELTAAGPVIVIAASFTNVAYERLPLEEDEQQQQQLQIQSPATTSSQGNNNNNPFPDPSSGLPFFNLPLNMQNVQLPPF 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01126 323 MobiDBLite consensus disorder prediction 73 139 - -
Gma05g01126 323 CDD DUF296 149 232 IPR005175 -
Gma05g01126 323 Gene3D - 148 288 - -
Gma05g01126 323 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 23 71 322 - -
Gma05g01126 323 ProSiteProfiles PPC domain profile profile. 145 283 IPR005175 -
Gma05g01126 323 Pfam Plants and Prokaryotes Conserved (PCC) domain 149 262 IPR005175 -
Gma05g01126 323 MobiDBLite consensus disorder prediction 1 28 - -
Gma05g01126 323 SUPERFAMILY AF0104/ALDC/Ptd012-like 145 277 - -
Gma05g01126 323 MobiDBLite consensus disorder prediction 274 306 - -
Gma05g01126 323 MobiDBLite consensus disorder prediction 271 306 - -
Gma05g01126 323 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 71 322 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01126 Gma-Chr5 32193681 32197663 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01126 55 321 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 65.744 2.24e-90 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01126 - - gmx:100789193 494.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01126 05 32193681 32197663 Gma05g01126 05 32193681 32197663 ECH
Gma17g01422 17 13365245 13366576 Gma05g01126 05 32193681 32197663 GST
Gma01g02017 01 55593451 55594203 Gma05g01126 05 32193681 32197663 PCT
Gma11g00393 11 3199363 3200610 Gma05g01126 05 32193681 32197663 PCT
Gma05g01126 05 32193681 32197663 Gma01g02017 01 55593451 55594203 PCT
Gma05g01126 05 32193681 32197663 Gma11g00393 11 3199363 3200610 PCT