Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01120 ATGAAGAACATTATTCCTGGTTGGGATTTTGAGACTGATGCATGTCTCACCAAACAAACAAAGCTCATAGGGCCAGACCAAGAACTTGTACAACTCCTATGGCAAAATGGGCAAGTAGTGAGGCACAACCAAACATATAGGAAGCCACTTGGGAATTCATCTAACTTGAGACAGGTGCAGAAAACGGATCATTCAACATTAAGGTCTAGTGGTCCCTATGGAAACTCAAGCAACTTGGATCAAGAAGAGGCCACCCCATGGATCCAATTCCCACTTGAGGACCCATTGGAACAAGACTTTTGTTCAAACCTTTTATCTGAACTACCACCAACTTGTGAATTTGAATCTTACAAGCCAATCAAGCAATTGGAAGAGGACAAGTTTACCAATTTTTTTGCTTCTAGTACCCCCCCATCATCTTACTACTTCAAGTTCAAAACCACTACCACCTAA 453 0.4172 MKNIIPGWDFETDACLTKQTKLIGPDQELVQLLWQNGQVVRHNQTYRKPLGNSSNLRQVQKTDHSTLRSSGPYGNSSNLDQEEATPWIQFPLEDPLEQDFCSNLLSELPPTCEFESYKPIKQLEEDKFTNFFASSTPPSSYYFKFKTTTT 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01120 150 MobiDBLite consensus disorder prediction 47 80 - -
Gma05g01120 150 PANTHER TRANSCRIPTION FACTOR PIF5 1 124 - -
Gma05g01120 150 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 1 124 IPR031066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01120 Gma-Chr5 31823504 31824047 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01120 7 110 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G43010 40.741 6.83e-14 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01120 K16189 - gmx:100811345 271.937