Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01097 ATGGAGGCAAAGAACATGAAATCACACCCATTGATAGATGAGTTCATTCCCGCTATTGAAGGAGAAGATGGAATTTGTTATACCCATCCAGAGAAGCTTCTAGGAGTAACAAGAGATGGGTTGAGCAAGCACTTTTTCCATAGACCTTCAAAAGCTTACACAACTGGGACAAGAAAGAGGAGAAAGATTCAAAACGAATGTGACTTGCAAGGTGGAGAAACCCTGTGGCACAAGCCAGTGATGGTGAACGGAAAACAAAAGGGTTGCAAGAAAATTCTAGTCCTCTACACCAACTTTGGAAAGAACAGAAAGCTCGAGAAAACCAACTGGGTGATGCACCAATACCATTTGGGGCAGCACGAGGAAGAGAAAGGAGAGGTAGTGGTGTCAAAGATATTCTACCAGACACAACCAAGGCAGTGCAACTGGTCAAATAAAAGTGCAATAACTGGTGAAGGAAGTGGAGAACCTAACAACAATAGTACTGGTAGAAGGGACAGTGGAAGTCGAAGTTGTTCTTCTAAGGAAATTGTTACTCACAGATATGAGATGTCTGTTGTTGTTGGTGTCCCTCCAATGACAAGTTTCACTACTCATGATCCTTTGGATATTCAACAACTAAAACTTGATCACTTTAGCTTCATCCCTTTCAAGAAAACCTTTGATGAGGTATATATACACTACAACTAA 690 0.413 MEAKNMKSHPLIDEFIPAIEGEDGICYTHPEKLLGVTRDGLSKHFFHRPSKAYTTGTRKRRKIQNECDLQGGETLWHKPVMVNGKQKGCKKILVLYTNFGKNRKLEKTNWVMHQYHLGQHEEEKGEVVVSKIFYQTQPRQCNWSNKSAITGEGSGEPNNNSTGRRDSGSRSCSSKEIVTHRYEMSVVVGVPPMTSFTTHDPLDIQQLKLDHFSFIPFKKTFDEVYIHYN 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01097 229 Pfam No apical meristem (NAM) protein 4 117 IPR003441 GO:0003677|GO:0006355
Gma05g01097 229 Gene3D NAC domain 2 139 IPR036093 GO:0003677|GO:0006355
Gma05g01097 229 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 2 217 IPR044799 GO:0003700
Gma05g01097 229 PANTHER NAC DOMAIN-CONTAINING PROTEIN 75 2 217 - -
Gma05g01097 229 MobiDBLite consensus disorder prediction 144 174 - -
Gma05g01097 229 SUPERFAMILY NAC domain 8 135 IPR036093 GO:0003677|GO:0006355
Gma05g01097 229 ProSiteProfiles NAC domain profile. 1 135 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01097 Gma-Chr5 31257840 31258949 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01097 8 145 NAC Transcription Factor Family AT5G56620 75.000 4.25e-74 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma05g01097 NAM 1.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01097 - - gmx:100791884 415.231