Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma05g01095 | ATGAAGAGTATGGAAAATGATGACAATGCTGACCTTAATAATCAAAACAATTGGTTGGGTTTCTCACTCTCTCCTCAAATGCATAATATAGGAGTTTCTTCACACTCACAACCTTCCTCTGCTGCTGAAGTGGTTCCTACAAGCTTTTACCACCACACTGCTCCACTTAGTAGCTATGGTTTCTACTATGGACTTGAAGCTGAAAATGTTGGATTGTATTCAGCTTTGCCAATCATGCCCCTCAAATCTGATGGCTCTCTCTATGGATTGGAAACTTTAAGCAGGTCACAAGCACAAGCAATGGCTACTACTTCAACACCAAAACTGGAGAACTTCTTAGGTGGGGAAGCCATGGGGACCCCTCATCACTACGAATGTAGTGCCACAGAAACAATGCCTCTGAGCTTAGACAGTGTTTTTTACATCCAACCCTCACGCCGTGACCCAAATAATAACCAAACCTACCAAAACCATGTTCAACACATTAGCACCAACCAACAACAACAACAGCAAGAGCTTCAAGCATATTACTCTACCTTGAGAAACCATGATATGATATTAGAAGGGTCAAAGCAAAGCCAAACTTCTGACAACAACAATCTTCATGTTCAAAACATGGGTGGTGATGATGCCGTTCCTGTTCCTGGCCTCAAGAGTTGGGAAGTGAGGAACTTCCAAGCTAGCCATGCACATGAGTCAAAGATGATTGTTCCTCATGTGGAGGAAAATGCTGGTGAATCAGGGTCCATTGGATCAATGGCTTATGGTGACTTGCAATCGTTGAGCTTGTCCATGAGTCCTAGCTCTCAGTCTAGCAGTGTCACAAGTTCTCACCGTGCTTCACCTGCTGTCGTTGATTCTGTTGCCATGGATACTAAGAAAAGGGGGCCTGAAAAGGTTGACCAGAAGCAAATTGTTCATAGGAAGTCCATTGACACCTTTGGACAAAGAACCTCCCAGTATAGAGGAGTAACAAGGCATAGGTGGACTGGGAGATATGAAGCTCATCTTTGGGACAACAGCTGCAAGAAAGAGGGGCAAAGCAGGAAAGGAAGACAAGGGGGTTATGATATGGAAGAAAAAGCTGCGAGAGCTTATGATCTAGCGGCACTCAAGTATTGGGGACCCTCCACTCACATAAACTTTCCTTTGGAAAATTATCAAAATGAACTTGAGGAAATGAAGAACATGACTAGACAAGAGTATGTTGCTCATTTGAGAAGAAAAAGCAGCGGATTCTCAAGAGGGGCTTCCATGTACAGAGGAGTAACAAGCAGACACCACCAACATGGAAGGTGGCAAGCTCGAATTGGTAGAGTGGCTGGAAACAAAGATCTATATCTTGGAACCTTTAGTACACAAGAGGAAGCAGCTGAAGCCTATGATATTGCTGCTATAAAATTCCGAGGAGCGAATGCTGTAACCAACTTTGACATAACAAGATATGATGTGGAGAAAATCATGGCAAGCAGCAACCTCCTTAGCAGTGAGCTAGCTAGGCGCAACCGAGAGACGGACAATGAAACTCAGTGCATTGATCAAAATCACAATAAGCCTTCTGCATATGAGGACACTCAAGAAGCTATTCTAATGCACCAGAAGAGCTGTGAGAGCGAAAATGATCAGTGGAAGATGGTTCTCTACCAATCCTCTCAGCAACTTGAGCAGAATCCACCAACAATTGAGAGTGACAGAACTAACCAGTCCTTCGCAGTGGCTTTGGACAGCATGTTTCATCAGGAAGTAGAGGAATCAAGTAAGGTGAGGACGCATGTGTCAAATCCTTCTTCATTGGCCACAAGTTTGAGCAGCTCAAGAGAAGGTAGCCCTGATAGGACAAGCTTGCCAATGCTCTCTGGAATGCCTTCAACTGCATCAAAACTATTGGCTACTAATCCAAATAACGTGAATTCTTGGGACCCTTCACCCCATTTGAGGCCAGCACTTACTTTGCCTCAAATGCCAGTTTTTGCAGCTTGGACAGATGCATAG | 1992 | 0.4418 | MKSMENDDNADLNNQNNWLGFSLSPQMHNIGVSSHSQPSSAAEVVPTSFYHHTAPLSSYGFYYGLEAENVGLYSALPIMPLKSDGSLYGLETLSRSQAQAMATTSTPKLENFLGGEAMGTPHHYECSATETMPLSLDSVFYIQPSRRDPNNNQTYQNHVQHISTNQQQQQQELQAYYSTLRNHDMILEGSKQSQTSDNNNLHVQNMGGDDAVPVPGLKSWEVRNFQASHAHESKMIVPHVEENAGESGSIGSMAYGDLQSLSLSMSPSSQSSSVTSSHRASPAVVDSVAMDTKKRGPEKVDQKQIVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQSRKGRQGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQNELEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTSRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGANAVTNFDITRYDVEKIMASSNLLSSELARRNRETDNETQCIDQNHNKPSAYEDTQEAILMHQKSCESENDQWKMVLYQSSQQLEQNPPTIESDRTNQSFAVALDSMFHQEVEESSKVRTHVSNPSSLATSLSSSREGSPDRTSLPMLSGMPSTASKLLATNPNNVNSWDPSPHLRPALTLPQMPVFAAWTDA | 663 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma05g01095 | 663 | CDD | AP2 | 418 | 480 | IPR001471 | GO:0003700|GO:0006355 | |
Gma05g01095 | 663 | SMART | rav1_2 | 320 | 389 | IPR001471 | GO:0003700|GO:0006355 | |
Gma05g01095 | 663 | SMART | rav1_2 | 419 | 484 | IPR001471 | GO:0003700|GO:0006355 | |
Gma05g01095 | 663 | MobiDBLite | consensus disorder prediction | 589 | 626 | - | - | |
Gma05g01095 | 663 | MobiDBLite | consensus disorder prediction | 262 | 303 | - | - | |
Gma05g01095 | 663 | MobiDBLite | consensus disorder prediction | 583 | 626 | - | - | |
Gma05g01095 | 663 | SUPERFAMILY | DNA-binding domain | 418 | 479 | IPR016177 | GO:0003677 | |
Gma05g01095 | 663 | Pfam | AP2 domain | 420 | 470 | IPR001471 | GO:0003700|GO:0006355 | |
Gma05g01095 | 663 | Pfam | AP2 domain | 320 | 375 | IPR001471 | GO:0003700|GO:0006355 | |
Gma05g01095 | 663 | ProSiteProfiles | AP2/ERF domain profile. | 419 | 478 | IPR001471 | GO:0003700|GO:0006355 | |
Gma05g01095 | 663 | SUPERFAMILY | DNA-binding domain | 319 | 385 | IPR016177 | GO:0003677 | |
Gma05g01095 | 663 | PRINTS | Ethylene responsive element binding protein signature | 460 | 480 | IPR001471 | GO:0003700|GO:0006355 | |
Gma05g01095 | 663 | PRINTS | Ethylene responsive element binding protein signature | 321 | 332 | IPR001471 | GO:0003700|GO:0006355 | |
Gma05g01095 | 663 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT | 14 | 661 | - | - | |
Gma05g01095 | 663 | CDD | AP2 | 319 | 383 | IPR001471 | GO:0003700|GO:0006355 | |
Gma05g01095 | 663 | MobiDBLite | consensus disorder prediction | 262 | 282 | - | - | |
Gma05g01095 | 663 | ProSiteProfiles | AP2/ERF domain profile. | 320 | 383 | IPR001471 | GO:0003700|GO:0006355 | |
Gma05g01095 | 663 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 14 | 661 | - | - | |
Gma05g01095 | 663 | Gene3D | AP2/ERF domain | 419 | 480 | IPR036955 | GO:0003700|GO:0006355 | |
Gma05g01095 | 663 | Gene3D | AP2/ERF domain | 319 | 385 | IPR036955 | GO:0003700|GO:0006355 | |
Gma05g01095 | 663 | Coils | Coil | 384 | 404 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma05g01095 | Gma-Chr5 | 31224989 | 31229198 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma05g01095 | 600 | 663 | AP2-EREBP Transcription Factor Family | AT4G37750 | 38.158 | 4.63e-06 | 47.8 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-AP2 | Gma05g01095 | AP2 | 4.4e-10 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma05g01095 | K09285 | - | gmx:100787611 | 1264.21 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma17g01451 | 17 | 13820814 | 13824739 | Gma05g01095 | 05 | 31224989 | 31229198 | GST | |
Gma01g01989 | 01 | 55309208 | 55312633 | Gma05g01095 | 05 | 31224989 | 31229198 | PCT | |
Gma11g00417 | 11 | 3463220 | 3466913 | Gma05g01095 | 05 | 31224989 | 31229198 | PCT | |
Gma05g01095 | 05 | 31224989 | 31229198 | Gma01g01989 | 01 | 55309208 | 55312633 | PCT | |
Gma05g01095 | 05 | 31224989 | 31229198 | Gma11g00417 | 11 | 3463220 | 3466913 | PCT |