Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01095 ATGAAGAGTATGGAAAATGATGACAATGCTGACCTTAATAATCAAAACAATTGGTTGGGTTTCTCACTCTCTCCTCAAATGCATAATATAGGAGTTTCTTCACACTCACAACCTTCCTCTGCTGCTGAAGTGGTTCCTACAAGCTTTTACCACCACACTGCTCCACTTAGTAGCTATGGTTTCTACTATGGACTTGAAGCTGAAAATGTTGGATTGTATTCAGCTTTGCCAATCATGCCCCTCAAATCTGATGGCTCTCTCTATGGATTGGAAACTTTAAGCAGGTCACAAGCACAAGCAATGGCTACTACTTCAACACCAAAACTGGAGAACTTCTTAGGTGGGGAAGCCATGGGGACCCCTCATCACTACGAATGTAGTGCCACAGAAACAATGCCTCTGAGCTTAGACAGTGTTTTTTACATCCAACCCTCACGCCGTGACCCAAATAATAACCAAACCTACCAAAACCATGTTCAACACATTAGCACCAACCAACAACAACAACAGCAAGAGCTTCAAGCATATTACTCTACCTTGAGAAACCATGATATGATATTAGAAGGGTCAAAGCAAAGCCAAACTTCTGACAACAACAATCTTCATGTTCAAAACATGGGTGGTGATGATGCCGTTCCTGTTCCTGGCCTCAAGAGTTGGGAAGTGAGGAACTTCCAAGCTAGCCATGCACATGAGTCAAAGATGATTGTTCCTCATGTGGAGGAAAATGCTGGTGAATCAGGGTCCATTGGATCAATGGCTTATGGTGACTTGCAATCGTTGAGCTTGTCCATGAGTCCTAGCTCTCAGTCTAGCAGTGTCACAAGTTCTCACCGTGCTTCACCTGCTGTCGTTGATTCTGTTGCCATGGATACTAAGAAAAGGGGGCCTGAAAAGGTTGACCAGAAGCAAATTGTTCATAGGAAGTCCATTGACACCTTTGGACAAAGAACCTCCCAGTATAGAGGAGTAACAAGGCATAGGTGGACTGGGAGATATGAAGCTCATCTTTGGGACAACAGCTGCAAGAAAGAGGGGCAAAGCAGGAAAGGAAGACAAGGGGGTTATGATATGGAAGAAAAAGCTGCGAGAGCTTATGATCTAGCGGCACTCAAGTATTGGGGACCCTCCACTCACATAAACTTTCCTTTGGAAAATTATCAAAATGAACTTGAGGAAATGAAGAACATGACTAGACAAGAGTATGTTGCTCATTTGAGAAGAAAAAGCAGCGGATTCTCAAGAGGGGCTTCCATGTACAGAGGAGTAACAAGCAGACACCACCAACATGGAAGGTGGCAAGCTCGAATTGGTAGAGTGGCTGGAAACAAAGATCTATATCTTGGAACCTTTAGTACACAAGAGGAAGCAGCTGAAGCCTATGATATTGCTGCTATAAAATTCCGAGGAGCGAATGCTGTAACCAACTTTGACATAACAAGATATGATGTGGAGAAAATCATGGCAAGCAGCAACCTCCTTAGCAGTGAGCTAGCTAGGCGCAACCGAGAGACGGACAATGAAACTCAGTGCATTGATCAAAATCACAATAAGCCTTCTGCATATGAGGACACTCAAGAAGCTATTCTAATGCACCAGAAGAGCTGTGAGAGCGAAAATGATCAGTGGAAGATGGTTCTCTACCAATCCTCTCAGCAACTTGAGCAGAATCCACCAACAATTGAGAGTGACAGAACTAACCAGTCCTTCGCAGTGGCTTTGGACAGCATGTTTCATCAGGAAGTAGAGGAATCAAGTAAGGTGAGGACGCATGTGTCAAATCCTTCTTCATTGGCCACAAGTTTGAGCAGCTCAAGAGAAGGTAGCCCTGATAGGACAAGCTTGCCAATGCTCTCTGGAATGCCTTCAACTGCATCAAAACTATTGGCTACTAATCCAAATAACGTGAATTCTTGGGACCCTTCACCCCATTTGAGGCCAGCACTTACTTTGCCTCAAATGCCAGTTTTTGCAGCTTGGACAGATGCATAG 1992 0.4418 MKSMENDDNADLNNQNNWLGFSLSPQMHNIGVSSHSQPSSAAEVVPTSFYHHTAPLSSYGFYYGLEAENVGLYSALPIMPLKSDGSLYGLETLSRSQAQAMATTSTPKLENFLGGEAMGTPHHYECSATETMPLSLDSVFYIQPSRRDPNNNQTYQNHVQHISTNQQQQQQELQAYYSTLRNHDMILEGSKQSQTSDNNNLHVQNMGGDDAVPVPGLKSWEVRNFQASHAHESKMIVPHVEENAGESGSIGSMAYGDLQSLSLSMSPSSQSSSVTSSHRASPAVVDSVAMDTKKRGPEKVDQKQIVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQSRKGRQGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQNELEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTSRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGANAVTNFDITRYDVEKIMASSNLLSSELARRNRETDNETQCIDQNHNKPSAYEDTQEAILMHQKSCESENDQWKMVLYQSSQQLEQNPPTIESDRTNQSFAVALDSMFHQEVEESSKVRTHVSNPSSLATSLSSSREGSPDRTSLPMLSGMPSTASKLLATNPNNVNSWDPSPHLRPALTLPQMPVFAAWTDA 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01095 663 CDD AP2 418 480 IPR001471 GO:0003700|GO:0006355
Gma05g01095 663 SMART rav1_2 320 389 IPR001471 GO:0003700|GO:0006355
Gma05g01095 663 SMART rav1_2 419 484 IPR001471 GO:0003700|GO:0006355
Gma05g01095 663 MobiDBLite consensus disorder prediction 589 626 - -
Gma05g01095 663 MobiDBLite consensus disorder prediction 262 303 - -
Gma05g01095 663 MobiDBLite consensus disorder prediction 583 626 - -
Gma05g01095 663 SUPERFAMILY DNA-binding domain 418 479 IPR016177 GO:0003677
Gma05g01095 663 Pfam AP2 domain 420 470 IPR001471 GO:0003700|GO:0006355
Gma05g01095 663 Pfam AP2 domain 320 375 IPR001471 GO:0003700|GO:0006355
Gma05g01095 663 ProSiteProfiles AP2/ERF domain profile. 419 478 IPR001471 GO:0003700|GO:0006355
Gma05g01095 663 SUPERFAMILY DNA-binding domain 319 385 IPR016177 GO:0003677
Gma05g01095 663 PRINTS Ethylene responsive element binding protein signature 460 480 IPR001471 GO:0003700|GO:0006355
Gma05g01095 663 PRINTS Ethylene responsive element binding protein signature 321 332 IPR001471 GO:0003700|GO:0006355
Gma05g01095 663 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 14 661 - -
Gma05g01095 663 CDD AP2 319 383 IPR001471 GO:0003700|GO:0006355
Gma05g01095 663 MobiDBLite consensus disorder prediction 262 282 - -
Gma05g01095 663 ProSiteProfiles AP2/ERF domain profile. 320 383 IPR001471 GO:0003700|GO:0006355
Gma05g01095 663 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 14 661 - -
Gma05g01095 663 Gene3D AP2/ERF domain 419 480 IPR036955 GO:0003700|GO:0006355
Gma05g01095 663 Gene3D AP2/ERF domain 319 385 IPR036955 GO:0003700|GO:0006355
Gma05g01095 663 Coils Coil 384 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01095 Gma-Chr5 31224989 31229198 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01095 600 663 AP2-EREBP Transcription Factor Family AT4G37750 38.158 4.63e-06 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Gma05g01095 AP2 4.4e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01095 K09285 - gmx:100787611 1264.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01451 17 13820814 13824739 Gma05g01095 05 31224989 31229198 GST
Gma01g01989 01 55309208 55312633 Gma05g01095 05 31224989 31229198 PCT
Gma11g00417 11 3463220 3466913 Gma05g01095 05 31224989 31229198 PCT
Gma05g01095 05 31224989 31229198 Gma01g01989 01 55309208 55312633 PCT
Gma05g01095 05 31224989 31229198 Gma11g00417 11 3463220 3466913 PCT