Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01091 ATGCTCTCCGCCCTCACTCCTTCCGACCCCTTCTCTCCCTTCTCCCCCTTCTCCGCCGGCTTCACGCCGTGGGATGACAACGACGATTCCCACGCCCTCTTCTCCCCCAAACCGGTCTCTGCTTCTAGCTCCGCCTCTGACTATAAATCCGAACCGAACCCAACCGAACACGTATGCGCCTCGTCCTCGGTGATGATGGACGAGCGGAAACGGCGCCGCATGATATCGAACCGGGAATCGGCCCGCAGGTCCAGGATGCGGAAACAGAGACACCTGGAGAATCTTCGGAACCAGTTGAACAAGTGCAGGGTCGAAAACCGGGAACTCGGTAACCGGTTGCAGTTCTTCCTGCACCACCTGAACCGCCTCCGAACCGAAAACGAATGGCTCCGCTCCGAGCGAACCCTGCTACGCCAAAAAGTCGCCAATTTAACACAAATTTTGATTTTCCAACAATTCCAAACCACCTTCTCCCCTGCTGCATGGACCACATGCACCAACAACAACACCACCTCGCTCATGACAATTAATCAAGTTAATTAA 543 0.5488 MLSALTPSDPFSPFSPFSAGFTPWDDNDDSHALFSPKPVSASSSASDYKSEPNPTEHVCASSSVMMDERKRRRMISNRESARRSRMRKQRHLENLRNQLNKCRVENRELGNRLQFFLHHLNRLRTENEWLRSERTLLRQKVANLTQILIFQQFQTTFSPAAWTTCTNNNTTSLMTINQVN 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01091 180 SMART brlzneu 65 129 IPR004827 GO:0003700|GO:0006355
Gma05g01091 180 PANTHER BZIP TRANSCRIPTION FACTOR 44 25 171 - -
Gma05g01091 180 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 67 130 IPR004827 GO:0003700|GO:0006355
Gma05g01091 180 MobiDBLite consensus disorder prediction 36 60 - -
Gma05g01091 180 PANTHER BNACNNG60880D PROTEIN 25 171 - -
Gma05g01091 180 MobiDBLite consensus disorder prediction 29 88 - -
Gma05g01091 180 CDD bZIP_plant_GBF1 70 121 IPR045314 GO:0003700|GO:0006355
Gma05g01091 180 Coils Coil 78 112 - -
Gma05g01091 180 MobiDBLite consensus disorder prediction 63 82 - -
Gma05g01091 180 Coils Coil 120 140 - -
Gma05g01091 180 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 72 87 IPR004827 GO:0003700|GO:0006355
Gma05g01091 180 Gene3D - 67 119 - -
Gma05g01091 180 SUPERFAMILY Leucine zipper domain 69 120 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01091 Gma-Chr5 31154504 31155046 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01091 1 152 bZIP Transcription Factor Family AT3G49760 38.554 5.26e-30 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma05g01091 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01091 - - gmx:778153 315.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01459 17 13897772 13898598 Gma05g01091 05 31154504 31155046 GST
Gma01g01988 01 55299320 55300059 Gma05g01091 05 31154504 31155046 PCT
Gma11g00418 11 3482861 3483610 Gma05g01091 05 31154504 31155046 PCT
Gma05g01091 05 31154504 31155046 Gma01g01988 01 55299320 55300059 PCT
Gma05g01091 05 31154504 31155046 Gma11g00418 11 3482861 3483610 PCT