Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01066 ATGGATACCTTGTTTAGACTAGTAAGTTTTCATCAACAACAACAACCCGATCCCTCCCTCAACTCCACGACCAGCAGAACCTCCAGCAGCTCCAGATCCTCCAGACAAAACTACTACCCTTATTCTTCCTATCAAGAAGAAGAAGAATGCTTCAACTTTTACATGGATGAAGAAGACTTATCCTCGTCTTCTTCCAAATACTACTACCCTTACCAACCCCATCACCAACAACAACAACAACAACAACACAACGTATCCAACATTTCTACAAACACCTTCAGCACCACCCCCAACACCGATTACTCCTACTCCTTCTCCCCCACCCCACAAGTTCAAGACTTCAACTTCGAATTCTCCCCCAACTGGTCCCACAACCTCCTCCTGGAATCCGCACGCGCCGTCGCCGACAACAACTCCACGCGCCTCCATCACCTCCTCTGGATGCTCAACGAGCTCAGCTCCCCCTACGGCGACACCGACCAAAAACTTGCCGCGTATTTCCTCCAAGCCCTGTTCAGCCGCGTCACCGAAGCCGGCGACCGAACCTACGGAACCTTAGCCTCGGCGTCCGAGAAAACATGCTCTTTCGAGTCAACAAGAAAAACGGTCCTGAAATTCCAAGAAGTTAGCCCTTGGACTACCTTCGGACACGTGGCATCCAATGGCGCCATCTTGGAAGCCTTGGAGGGAAACCCCAAATTGCACATACTAGACATCAGCAACACTTATTGCACCCAGTGGCCAACGCTTCTGGAAGCGTTGGCCACACGGAGCGATGAAACACCGCATCTGCGCTTGACCACCGTTGTCACGGGTAGAACGAGTAATTCCGTTCAGCGCGTAATGAAGGAAATCGGAACGCGGATGGAGAAATTCGCGAGGCTCATGGGCGTTCCGTTTAAGTTCAACGTCATTCATCATTACGGAGATCTCTCCGAGTTCAATTTCAACGAACTTGATATCAAAGAGGATGAAGCTTTGGCTGTGAATTGTGTGAACAGGCTGCATTCGGTTTCCGCCGTAGGAAACAACCGCGACGCGTTGATATCGTCGTTGCAAGCGTTGCAGCCGCGGATTGTGACGGTGGTGGAGGAGGAGGCTGATTTGGACGTTGGGATCGACGGTTACGAGTTCGTGAAAGGCTTTGAGGAATGTTTGAGGTGGTTTAGGGTTTACTTCGATGCTTTGGACGAGAGTTTTGTGAAGACGAGCAACGAGAGGCTGATGCTGGAGCGAGCGGCAGGGAGGGCGGTGGTGGACCTGGTGGCGTGCTCGACGGCGGAGTCCGTGGAGCGCCGCGAGACGGCGGCGCGGTGGGTGGCGAGGCTTCACAACGGAGGGCTGAAGGCGGCGCCGTTTAGCGAGGAGGTTTGTGACGACGTGAGGGCGCTGTTGAGGAGGTACAGGGAAGGGTGGTCGATGGCGGCGTGCTCCGATGCCGGAATATTCCTCTCGTGGAAGGACACGCCGGTGGTGTGGGCCAGTGCATGGAGGCCATAA 1500 0.5387 MDTLFRLVSFHQQQQPDPSLNSTTSRTSSSSRSSRQNYYPYSSYQEEEECFNFYMDEEDLSSSSSKYYYPYQPHHQQQQQQQHNVSNISTNTFSTTPNTDYSYSFSPTPQVQDFNFEFSPNWSHNLLLESARAVADNNSTRLHHLLWMLNELSSPYGDTDQKLAAYFLQALFSRVTEAGDRTYGTLASASEKTCSFESTRKTVLKFQEVSPWTTFGHVASNGAILEALEGNPKLHILDISNTYCTQWPTLLEALATRSDETPHLRLTTVVTGRTSNSVQRVMKEIGTRMEKFARLMGVPFKFNVIHHYGDLSEFNFNELDIKEDEALAVNCVNRLHSVSAVGNNRDALISSLQALQPRIVTVVEEEADLDVGIDGYEFVKGFEECLRWFRVYFDALDESFVKTSNERLMLERAAGRAVVDLVACSTAESVERRETAARWVARLHNGGLKAAPFSEEVCDDVRALLRRYREGWSMAACSDAGIFLSWKDTPVVWASAWRP 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01066 499 MobiDBLite consensus disorder prediction 8 39 - -
Gma05g01066 499 ProSiteProfiles GRAS family profile. 114 498 IPR005202 -
Gma05g01066 499 PANTHER PROTEIN SHORT-ROOT 1 498 IPR030019 GO:0003700|GO:0005634|GO:0008356|GO:0009956|GO:0043565|GO:0048366
Gma05g01066 499 Pfam GRAS domain family 125 498 IPR005202 -
Gma05g01066 499 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 498 IPR005202 -
Gma05g01066 499 MobiDBLite consensus disorder prediction 65 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01066 Gma-Chr5 30441050 30442588 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01066 1 499 GRAS Transcription Factor Family AT4G37650 58.537 0.0 574
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma05g01066 GRAS 5.4e-104 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01066 - - gmx:100778524 939.488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01482 17 14199802 14201600 Gma05g01066 05 30441050 30442588 GST
Gma01g01971 01 55170589 55172019 Gma05g01066 05 30441050 30442588 PCT
Gma11g00437 11 3614064 3615512 Gma05g01066 05 30441050 30442588 PCT
Gma05g01066 05 30441050 30442588 Gma01g01971 01 55170589 55172019 PCT
Gma05g01066 05 30441050 30442588 Gma11g00437 11 3614064 3615512 PCT