Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01061 ATGAAAGCTCATCATCATCATCATCATCATTTGAGCTTCTTTTCTATCCTATCATTGTTCACTCTATTCTTCTCCACTTCCCAAACTACCATTACCAACAAAACTCAATTATCAGTTCACAATGAAACAAGAAGAATTCTCCACCAGCCGTTGTTCCCGGCGGTGTCGGCTCCACCGCCGGTTACTCCGCCACCGCCGGCGCCGCTGGATATTCCGTCTTCTCCCGACATTCCTTTCTTCAACGAGTATCCCGCTGGGCAGCCGCCGCCGGTGCAGAATCTGCCTCCGGTGACAACCTCTGGCGGTATGATCGCGAACCCAACTGCGACGCAGCCAACGAAACCCGCGAAGAAGGTGGCAATTGTGATCTCCGTGGGAATTGTTACACTTGGAATGTTCTCTGCATTAGGCTTCTTCTTATACAGACACAGAGTGAGACACCCGGCAGAGACGCAGAAACTGGTTTCTCGGAAGGTTCTAGAAGATTCTCCGCGGGCCCCACCACCGCCGCCACCCTCGAGCTTCCTCTACATTGGCACGGTGGAGCCCACCAGAACTTCGCTGAGCGAACCCAATGGAATAACCGTTAACACTTCCCCTTATCGGAAACTTGATTCCATTAAGCTTAGCTCCAATCACCGTTACCGCCCCAGCCCCGAGTTGCAGCCGCTGCCGCCGCCGCACAAGCCTCCGGACGAGAGCCATTCGCCGGCGGCGGAATTCTCCGACTCCTCATCCTCTTCTGAGGAGGAAAGCTGCGAGACGGCGTTCCACTCGCCGCACGGCTCCTCGCTCGGCTGCGAAGAGAATTTCTTTACGCCGGTCTCGCGCCACAGTTGTCTCTCCGCTGCCGCGGCGGCACCGGTGGTTCCTCACTCGAAGAGAACTTCTCCGAAATCCCGGTTTTCCGCTCCTACTCCGGAGATCAGAAACATTGTCGTTCCGCCGGTTAAGCCTTCTCCGGCACCGGCGCCGGTGCCGGCCGCTTCAACAAAATATCATCACGTGGACAAAGAATTAACATTGGGTCCTTCTAGAAGACCCAAATTCTCATCGCATCCCCCAGCACCGAATTTGACTCATCTTCATTCAAATGAGTTCACAACTTCACTTAAACCTCCTCCTCCTCCGCCACCGCCACCACCGCCACCACAGACACTGCCGTTGAGAAAGGTCTGGTCTCTGTCAATTAGTACATCTTCTTCCTCAGTGTCAAGGAAGAACGGAGAGTCATGGTCCCCAAATGAAGGAGGGTCTTCTGGTAACCGTGTTAGTGTAAGGAAAGGTTCTTTTGAGGAAGTTTACCAAAGGCGTGAAGGTGATGATGTGGATGGAGCAAAACCCAAGTTGAAGGCTCTGCATTGGGATAAAGTGTCTACTACTTCGGACCGTGCCACTGTGTGGGACCAGTTAAAATTCAGCTCCTTTCAGTTAAATGAGGACATGATGGAGACACTGTTTGGCTGCAAATCCACAGGTTCTGCTTCTAAAGAGAATGTTACTAGAAGATCAGTTCTTCCTCCTGCTGAACCGGAGAATAGGGTGTTGGATCCAAAGAAGTCTCAAAACATAGCTATACTGCTAAGGGCACTCAATGTGACTAGAGATGAGGTGTGCGAAGCTCTTTTAGATGGGAATCCTGAAGGTTTAGGAAGTGAGCTATTGGAGACTCTAGTGAAGATGGCTCTAACAAAGGAGGAAGAAATAAAACTTAAAGATTATGATGGTGACCTCTCAAGACTTGGCTCTGCAGAAAGATTCCTTAAAGCAGTGCTTGATATCCCTTTAGCTTTTAAAAGAATTGAAGCTATGCTGTACAGAGCTAATTTTGAAACTGAAGTTAACTACCTTAGGAAGTCCTTTCAGACCCTGGACGTGGCAAGTGAGGAATTAAAGAACAGTCGGTTATTCCTCAAACTTCTTGAAGCTGTTCTAAGGACAGGAAACAGAATGAATGTTGGCACAAATCGCGGTGGCGCTATATCTTTCAAACTGGACACACTTCTAAAACTTGTAGACATAAAGGGCACAGATGGGAAGACAACACTGCTCCACTTTGTGGTCCAAGAGATCATTAGATCTGAAGGAACAGGCGGTGAATCTGCAAACTGCAATGTTCAAAACCAAACGAATTCCCAATTCAGCGAGGATGAGTTCAGAAAGAAAGGATTGCAGGTTGTGGCTGGACTGAGTAGGGACCTTGGAAATGTCAAAAAGGCAGCAGGAATGGACTCGGATGTTTTAAGCAGCTATGTCTCAAAGCTTGAAATTGGACTTGACAAAGTGAGATTAGTTTTGCAATGTAGAAAGCCGGATATGCACGGGAATTTCTTTAACTCAACTGCACTGTTTCTGAAAGATGCTGAAGAGGAAATTGTTAGGATCAAGGCTGATGAGAGAAAGGCCTTGTTCCTTGTGAAAGAAGTTACAGAATACTTTCACGGGGATGCAGCAAAGGAAGAAGCGCACCCTTTCCGAATTTTTATGGTTGTAAGAGACTTTCTAAATAGTTTGGATCAAGTCTGCAAAGAAGTGGGAAGGATGCAGGATAGGACTGTGATTGGTTCAGCTAGATCCTTCAGGATAGCCGCAAGTGCATCGTTACCTGTTCTCAACAAGTACCATGCAAGACAAGATAGAAGTTCAGATGAGGAAAGCTTATCCCCCTAG 2670 0.4828 MKAHHHHHHHLSFFSILSLFTLFFSTSQTTITNKTQLSVHNETRRILHQPLFPAVSAPPPVTPPPPAPLDIPSSPDIPFFNEYPAGQPPPVQNLPPVTTSGGMIANPTATQPTKPAKKVAIVISVGIVTLGMFSALGFFLYRHRVRHPAETQKLVSRKVLEDSPRAPPPPPPSSFLYIGTVEPTRTSLSEPNGITVNTSPYRKLDSIKLSSNHRYRPSPELQPLPPPHKPPDESHSPAAEFSDSSSSSEEESCETAFHSPHGSSLGCEENFFTPVSRHSCLSAAAAAPVVPHSKRTSPKSRFSAPTPEIRNIVVPPVKPSPAPAPVPAASTKYHHVDKELTLGPSRRPKFSSHPPAPNLTHLHSNEFTTSLKPPPPPPPPPPPPQTLPLRKVWSLSISTSSSSVSRKNGESWSPNEGGSSGNRVSVRKGSFEEVYQRREGDDVDGAKPKLKALHWDKVSTTSDRATVWDQLKFSSFQLNEDMMETLFGCKSTGSASKENVTRRSVLPPAEPENRVLDPKKSQNIAILLRALNVTRDEVCEALLDGNPEGLGSELLETLVKMALTKEEEIKLKDYDGDLSRLGSAERFLKAVLDIPLAFKRIEAMLYRANFETEVNYLRKSFQTLDVASEELKNSRLFLKLLEAVLRTGNRMNVGTNRGGAISFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEGTGGESANCNVQNQTNSQFSEDEFRKKGLQVVAGLSRDLGNVKKAAGMDSDVLSSYVSKLEIGLDKVRLVLQCRKPDMHGNFFNSTALFLKDAEEEIVRIKADERKALFLVKEVTEYFHGDAAKEEAHPFRIFMVVRDFLNSLDQVCKEVGRMQDRTVIGSARSFRIAASASLPVLNKYHARQDRSSDEESLSP 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01061 889 Pfam Formin Homology 2 Domain 445 838 IPR015425 -
Gma05g01061 889 MobiDBLite consensus disorder prediction 238 259 - -
Gma05g01061 889 MobiDBLite consensus disorder prediction 206 264 - -
Gma05g01061 889 SMART it6_source 440 853 IPR015425 -
Gma05g01061 889 PANTHER FORMIN-LIKE PROTEIN 9 889 - -
Gma05g01061 889 MobiDBLite consensus disorder prediction 312 326 - -
Gma05g01061 889 MobiDBLite consensus disorder prediction 287 330 - -
Gma05g01061 889 MobiDBLite consensus disorder prediction 156 178 - -
Gma05g01061 889 ProSiteProfiles Formin homology-2 (FH2) domain profile. 440 864 IPR015425 -
Gma05g01061 889 MobiDBLite consensus disorder prediction 391 426 - -
Gma05g01061 889 Gene3D Formin, FH2 domain 442 850 IPR042201 -
Gma05g01061 889 PANTHER FORMIN-RELATED 9 889 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gma05g01061 889 SUPERFAMILY Formin homology 2 domain (FH2 domain) 374 850 - -
Gma05g01061 889 MobiDBLite consensus disorder prediction 370 388 - -
Gma05g01061 889 MobiDBLite consensus disorder prediction 342 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01061 Gma-Chr5 30327054 30331571 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01061 389 879 FH2 protein (formin) Gene Family AT5G67470 68.548 0.0 636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01061 - - gmx:100776403 1532.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01487 17 14246187 14250519 Gma05g01061 05 30327054 30331571 GST
Gma01g01961 01 55093047 55097863 Gma05g01061 05 30327054 30331571 PCT
Gma11g00446 11 3685670 3690895 Gma05g01061 05 30327054 30331571 PCT
Gma05g01061 05 30327054 30331571 Gma01g01961 01 55093047 55097863 PCT
Gma05g01061 05 30327054 30331571 Gma11g00446 11 3685670 3690895 PCT