Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01057 ATGGGAGAGTTTGAGTTTGCTCCAACGGTGCTTGTGAGTGTGAGAGAGTTCGACCCAAATAACGACAGAGAGGGAGTGGAAGCCGTTGAAAGAATATGTGAGGTTGGACCCAATGGAAAGCTTTCCCTCTTCACCGACCTCCATGGTGACCCAATTTGCAGGGTCCGCAACTCACCTACTTTCCTCATGCTGATAGCCGAAATTGGGCAAGAGACAGTAGGAATGATAAGAGGTTGCATCAAAACCGTTACTTGCGGAAAAAAGCTCCATAGGCAAGGAAAAAGCAACACGGAAACCGAACCAAAACAAGTCCCTATTTACACAAAACTCGCATACATATTAGGCCTCCGTGTTTCTCCACATCACAGGAGAATGGGAATAGGTTTTAAGCTTGTACAGAGTATGGAGGAATGGTTCAGGGATAACGGAGCGGAATACGCGTACATGGCTACGGAGAAAGACAACGTGGCATCGGTTAAGTTGTTCACGGACAAATGCGGGTATTCAAAGTTCCGTACACCGTGCATTCTCGCGAACCCCGTTTTTGCTCACCACGTGAGAATCTCTAACAAAGTCACAATCATTGAGCTCTCACCGAATGACGCCGAATTGCTCTACCGCAGCAAGCTCGCCACGACGGAGTTCTTCCCGCGCGACGTGGACTCCGTGCTCGGCAACAGGCTTAGCCTGGGCACCTTCCTCGCCGTCCCGCGTGTTGGCTCGTACCAGCCCGACACGTGGTCCGGCTCGGCCCGGTTTTTATTGGACCCACCACCTTCTTGGGCCATTCTCAGCGTGTGGAACTGCAAGGATGTGTTCACGCTCGAGGTGAAAGGCGTGTCGCGCGTGAAGAAGACGCTTGCCAAGACCACTCGCGTCCTCGATCGCGTCTTTCCCTGGCTGCGCTTGCCGTCAGTCCCCAATTTCTTTGAGCCCTTCGGGTTTCTTTTTTTGTATGGGCTTGGTGGGGAGGGCCCGCAGGCCCAGCAGATGTTACGGGCTTTGTGCGGGTTTGCCCATAACTTAGCTAAGGATCGTGGCTGCGAGGTCGTGGCCACCGAAGTTTCAAGCCAAGAACCCTTACGGTGTGCCATCCCGCACTGGAAGATGCTCTCATGTGAAGAAGATCTGTGGTGCATTAAGAGATTAGGAGAAGATTACAGTGATGGCTCTCTTGGTGATTGGACAAAATCGCCTCCAGGATTCTCAATTTTTGTTGATCCAAGAGAGGTTTAA 1236 0.5178 MGEFEFAPTVLVSVREFDPNNDREGVEAVERICEVGPNGKLSLFTDLHGDPICRVRNSPTFLMLIAEIGQETVGMIRGCIKTVTCGKKLHRQGKSNTETEPKQVPIYTKLAYILGLRVSPHHRRMGIGFKLVQSMEEWFRDNGAEYAYMATEKDNVASVKLFTDKCGYSKFRTPCILANPVFAHHVRISNKVTIIELSPNDAELLYRSKLATTEFFPRDVDSVLGNRLSLGTFLAVPRVGSYQPDTWSGSARFLLDPPPSWAILSVWNCKDVFTLEVKGVSRVKKTLAKTTRVLDRVFPWLRLPSVPNFFEPFGFLFLYGLGGEGPQAQQMLRALCGFAHNLAKDRGCEVVATEVSSQEPLRCAIPHWKMLSCEEDLWCIKRLGEDYSDGSLGDWTKSPPGFSIFVDPREV 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01057 411 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 52 170 IPR016181 -
Gma05g01057 411 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE-RELATED 10 410 - -
Gma05g01057 411 PANTHER N-ACETYLTRANSFERASE 10 410 - -
Gma05g01057 411 Pfam Acetyltransferase (GNAT) family 54 168 IPR000182 GO:0016407
Gma05g01057 411 CDD NAT_SF 63 148 - -
Gma05g01057 411 Gene3D - 45 173 - -
Gma05g01057 411 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 12 193 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01057 Gma-Chr5 30243066 30244592 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gma05g01057 Acetyltransf_1 1.6e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01057 - - gmx:100775317 831.247
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01490 17 14337828 14339886 Gma05g01057 05 30243066 30244592 GST
Gma01g01959 01 55065061 55067188 Gma05g01057 05 30243066 30244592 PCT
Gma11g00448 11 3719471 3720933 Gma05g01057 05 30243066 30244592 PCT
Gma05g01057 05 30243066 30244592 Gma01g01959 01 55065061 55067188 PCT
Gma05g01057 05 30243066 30244592 Gma11g00448 11 3719471 3720933 PCT