Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01045 ATGACGCAATTCACACCCTCACTTCCTCCCTTGCACCACCAAATCACACCCCTCCTCCAAAACCCTAACATAATGAACAAAAACCAAATCCCTAGGCCTAGGCCTTGGCCTGCAGCATGCTTCCCTACTACCTCCAAGGCCCTCTCCAACTTCGGCGACGCTAACTGCATGGAACAGTTGCTTGTTCACTGCGCCAACGCTATTGAAACCAACGACGTAACCCTCGCACAACAGATCCTTTGGGTGCTCAACAACATAGCTCCCCCTGATGGTGACTCCAACCAACGCCTCGCCTCTGGCTTCCTCCGCGCCCTCACCGCACGTGCCGCCAAAACCGGCACGTGCAAGATGCTCGTCCCCGCCGGCGGCACCAACCTCTCCATTGACACGCACAGATTCAACGTCATTGAGCTCGCTAACTTCGTCGACTTAACCCCGTGGCACCGCTTCGGCTTCACCGCCGCCAACGCCGCCATCCTAGAGGCCACTGAAGGGTTCTCCGTGATCCATATTGTCGACCTAAGCTTGACGCATTGCATGCAAATTCCCACACTTGTCGACGCCATCGCCAGCCGCAACTACCACGAGGTGCCGCCGCCGATAATCAAGCTCACGGTGGCGGCGGACGCTAGCTTCAGGGACAACATCCCTCCCATGCTCGACCTCTCCTACGACGAACTCGGAGCCAAGCTGGTGAATTTCGCCCGGTCTAGAAACATGGTCATGGAATTCAGAGTGGTTTCTTCGAGTTACCGAGACGGGTTCGCGGGTTTGATCGAACATTTAAGAGTGCAACAACAACATTTTGTTTATGCAGCAGAATCTCGTACTACTCCGAGTGAGGCTTTGGTTATAAACTGTCACATGATGCTTCATTACATCCCCGATGAAACCCTATCTGATACAACAGGCTTGACCTCTTTTCTCTACGATTCTTCTTCTCTTGCTGCTTCTTCTGCTGTTAGCGTTACTCCCACTTCCTCACTGCGATCATTGTTCCTTAAGTCCCTGCGAGGTTTAGACCCAACGGTCGTAATCTTGGTCGACGAAGATGCGGATTTGACTTCGAACAACTTGGTATGCAGACTAAGATCCGCGTTTAACTACCTATGGATCCCTTACGACACAGTGGACACGTTCTTGCCGCGAGGGAGCAAGCAGAGGCAGTGGTACGAGGCAGACATATGCTGGAAGATTGAGAATGTGATTGCACACGAAGGGGTTCAGAGAGTTGAGCGGGTTGAGCCTAAGAACAGGTGGGAGCAGCGAATGAAGAATGCGAGCTTTCAAGGAGTTGCTTTCAGTGAAGACTCTGTAGCAGAAGTGAAGGCCATGCTCGATGAACATGCTGCTGGGTGGGGATTGAAGAAGGAAGATGAACACATTGTGCTCACTTGGAAAGGACACAATGTGGTCTTCGCCTCTGCTTGGTTACCTGCTTGA 1443 0.5246 MTQFTPSLPPLHHQITPLLQNPNIMNKNQIPRPRPWPAACFPTTSKALSNFGDANCMEQLLVHCANAIETNDVTLAQQILWVLNNIAPPDGDSNQRLASGFLRALTARAAKTGTCKMLVPAGGTNLSIDTHRFNVIELANFVDLTPWHRFGFTAANAAILEATEGFSVIHIVDLSLTHCMQIPTLVDAIASRNYHEVPPPIIKLTVAADASFRDNIPPMLDLSYDELGAKLVNFARSRNMVMEFRVVSSSYRDGFAGLIEHLRVQQQHFVYAAESRTTPSEALVINCHMMLHYIPDETLSDTTGLTSFLYDSSSLAASSAVSVTPTSSLRSLFLKSLRGLDPTVVILVDEDADLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEADICWKIENVIAHEGVQRVERVEPKNRWEQRMKNASFQGVAFSEDSVAEVKAMLDEHAAGWGLKKEDEHIVLTWKGHNVVFASAWLPA 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01045 480 ProSiteProfiles GRAS family profile. 48 478 IPR005202 -
Gma05g01045 480 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 31 478 IPR005202 -
Gma05g01045 480 PANTHER SCARECROW-LIKE PROTEIN 32 31 478 - -
Gma05g01045 480 Pfam GRAS domain family 57 477 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01045 Gma-Chr5 29937601 29939043 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01045 24 479 GRAS Transcription Factor Family AT3G49950 55.628 3.19e-177 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma05g01045 GRAS 3.6e-87 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01045 - - gmx:100814364 959.133