Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01043 ATGAGTTGCAACGGGTGCCGCGTTCTTCGAAAGGGATGCAGCGAGTCCTGTATGTTGCGCCCTTGTTTGCAGTGGATCGAAACCGCCCAAGCTCAAGGCCACGCCACTGTCTTCGTCGCCAAATTCTTCGGCCGTGCCGGCCTCATGTCCTTCATTTCCAACGTTCCAGAAAATCAAAGACCCGCGCTGTTTCAGTCGCTGCTCTTCGAAGCGTGCGGGAGAACGGTGAACCCCGTGAACGGCGCCGTGGGACTTCTCTGGACCGGGAACTGGCACGTTTGCCAGGCCGCGGTGGAGACGGTGCTCCGCGGTGGCACGCTGAGGCCCATGCCGGAGCTCATGGGCCTCGACGCTCCCGCCGCCGCGGCCACCGATGAAGCATCGGAGGCCGAAGTGGCCTGCACCGACACGTGGAGGATCCGAAACCCGAACCCGAATTGCCGGTTCACAAGCTCGCGGTCCTCCGGCTGCGGCGGCGGCGGCAAACGCAAGCGGTCGGAGGAGCTGGCAAAGCTTCAGGCGCAGCCGAATCTCGATCTCCGGCTGACGCCGGTTTTTTCGCAGAAGGTTGAGAGCCGCCGGCCGGAATCTCCGTCGATGACATCGGTGGAATCCGGAACGACGACGGAGAACAGATTTGGGGATCAGTGGGGTCACCGGAAAGTTCTCAACCTTTTCATTTGA 684 0.6184 MSCNGCRVLRKGCSESCMLRPCLQWIETAQAQGHATVFVAKFFGRAGLMSFISNVPENQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPMPELMGLDAPAAAATDEASEAEVACTDTWRIRNPNPNCRFTSSRSSGCGGGGKRKRSEELAKLQAQPNLDLRLTPVFSQKVESRRPESPSMTSVESGTTTENRFGDQWGHRKVLNLFI 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01043 227 MobiDBLite consensus disorder prediction 190 213 - -
Gma05g01043 227 MobiDBLite consensus disorder prediction 187 213 - -
Gma05g01043 227 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Gma05g01043 227 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 227 - -
Gma05g01043 227 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Gma05g01043 227 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01043 Gma-Chr5 29826882 29828358 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01043 1 227 AS2 family AT4G37540 58.233 3.99e-85 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma05g01043 LOB 9.7e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01043 - - gmx:100816480 452.595