Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01042 ATGGGAGGTAGAAACATTGTTCTGGTTGATGCTATAAGCTGTAGAATACCATTGGTTAGTGACATATCAAGTATAATATTTGGAGCGGATGCTACCCATCCTAGAAATGGAGAAGACTCCAACCCTTCATTACTAGATGTAGTAGCATCTCAACACTGGCCTGAACTGAAAAAATGTGTTGGTTTAGTGTGTGCTCAAGCTCATAGACAAGAACTCATACAAGATTCCTACAAAATGTGGCATAACCTTGTTCATGCCTTAGTCAGTGGTGGTATGATCCAGTAA 285 0.4 MGGRNIVLVDAISCRIPLVSDISSIIFGADATHPRNGEDSNPSLLDVVASQHWPELKKCVGLVCAQAHRQELIQDSYKMWHNLVHALVSGGMIQ 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01042 94 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 1 94 - -
Gma05g01042 94 PANTHER ARGONAUTE1 1 94 - -
Gma05g01042 94 Gene3D - 15 89 IPR036397 GO:0003676
Gma05g01042 94 Pfam Piwi domain 1 79 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01042 Gma-Chr5 29820220 29820593 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01042 1 94 Eukaryotic Initiation Factors Gene Family AT5G43810 74.468 3.75e-45 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01042 K11593 - gmx:100819073 152.91