Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01040 ATGATAGAACAAAACATCATTGGTAGTCATGGATACGGTATAGTATACCGCATTGATGTTGGTTCAGGCTATGTTGCTGTCAAAAAGGTTTGGAATAATAGAAAGTTAGAAAAGAAGCTCGAGAAGTCCTTCCGTGCAGAAGTTAGAAAACTGAGCAATATTCGTCATACCAACATTTTGAGATTGATGTGTTGTATCTCTAATGAGGATTCTATGCTCCTTGTGTATGAGTATCTAGAAAATCACAACCTAGATAGGTGGTTGCACAAGAAGGTTAAGTCAGGTTCAGTAAGTAAAGTGGTCCTTGATTGGCCTTGGTTGAAAATAGCCATTGCATTTGTTCAAGGTTTAAGCTATATGCACCATGACTGTTCACCACATATGGTTCATAGAGATATAAAAACAAGCAACATCATTTTGGATACTCAATTCAATGCAAAAGTTGGTGGTTTTGGACTCGCTAAGATGTTAATTAAGCCAGGGGAACTTAACACCATGTCAGTTGTGATTGGGTCATTTGGCTATATTGCTCCAGGTGAGTGA 543 0.3812 MIEQNIIGSHGYGIVYRIDVGSGYVAVKKVWNNRKLEKKLEKSFRAEVRKLSNIRHTNILRLMCCISNEDSMLLVYEYLENHNLDRWLHKKVKSGSVSKVVLDWPWLKIAIAFVQGLSYMHHDCSPHMVHRDIKTSNIILDTQFNAKVGGFGLAKMLIKPGELNTMSVVIGSFGYIAPGE 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01040 180 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 178 - -
Gma05g01040 180 SMART serkin_6 1 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g01040 180 SUPERFAMILY Protein kinase-like (PK-like) 4 178 IPR011009 -
Gma05g01040 180 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Gma05g01040 180 Pfam Protein kinase domain 4 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g01040 180 Gene3D Transferase(Phosphotransferase) domain 1 1 179 - -
Gma05g01040 180 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 1 178 - -
Gma05g01040 180 ProSiteProfiles Protein kinase domain profile. 1 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01040 Gma-Chr5 29785485 29786027 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01040 1 178 Receptor kinase-like Gene Family AT5G25930 58.242 6.99e-65 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gma05g01040 Pkinase 1.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01040 - K00924 gmx:100813894 317.775