Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01029 ATGAGTTCACTTCCTTCCAACAGCTTCACCATCACCGACCCCTCCATCCCGGGACACCCCATCGTCTTCGCCAACCCAAGCTTCCTCAAGCTCACGGGCTACTCCCTCCGCGAAGTCCTGGGCTGGCCCGCAGCCATCTTCTCGGGCCCATTAACATCCCAAAAATTTGTCATTTTGCTCAACTACCACAGAGATGGTATGCCGTTTTGGATGCTTTTTTGTGTTTCCCCTATTTTCAGTAGCGACGGTGGCGCCGTCGTGCACTTTATTGTTGTACAGAGAGAAGAGTCGTGTGAGGCGAGTGATGATGAGAAGCGAAGTGTTGTTACTGCCATGGACTGTATATTTTTTGTGCTAACCCATTACGGTGAGGCCACAGGGAGATTGGTGTGTAGAAAGAGTTCCAGCATTCCTGACGTGGGTCTTTTAAGCACATCCTTGATTATTTCTCTTGGTAGAATCAAACAAAGCTTTGTATTAACTAATCCGCATTTACCAGACATGCCTACTGTTTATGCTAGTGATACCTTGTTGAATTTGACAGCTAGGAAAATAGCTAGCATACTTAAGGCAATTATGAGCGTCTTATTTATTGGCTATAGATCAATAGACAGGATTATAAGCAGCAGAGGCCATCAAAAGAGCTTGTTGCCAAAGACCTGCATGGTGTGGAGTGGAAATTTCATCACATTTACAGAGGTCAGCCAAGGCGGCATCTACTCACTACTAGATGGAGCATTTTTTGTCAGTCAAAAGAATCTTGTCTCCGGTGATGTAGTGCTCTTCCTAAGGATTGTTGCTGATGGGGAAGAGGGGGATACTGGAGCTATGGTGAAGTCAACAACTCCCCGTATGTTCTGCAAGACTCTTAGAGCTTCAGACACCATCACTCATGGTGGATTCTCAGTTCCTCATCGAGCAGCTGAAGATTGTTTTCCTTCCCTGGTATTGAATGATGTGTTGCAACAATGGATTGGAAAATCTGCTAATGCATTAAATAATATAGGGATGTGA 1014 0.4527 MSSLPSNSFTITDPSIPGHPIVFANPSFLKLTGYSLREVLGWPAAIFSGPLTSQKFVILLNYHRDGMPFWMLFCVSPIFSSDGGAVVHFIVVQREESCEASDDEKRSVVTAMDCIFFVLTHYGEATGRLVCRKSSSIPDVGLLSTSLIISLGRIKQSFVLTNPHLPDMPTVYASDTLLNLTARKIASILKAIMSVLFIGYRSIDRIISSRGHQKSLLPKTCMVWSGNFITFTEVSQGGIYSLLDGAFFVSQKNLVSGDVVLFLRIVADGEEGDTGAMVKSTTPRMFCKTLRASDTITHGGFSVPHRAAEDCFPSLVLNDVLQQWIGKSANALNNIGM 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01029 337 Pfam PAS domain 17 94 IPR000014 -
Gma05g01029 337 ProSiteProfiles PAS repeat profile. 1 41 IPR000014 -
Gma05g01029 337 SUPERFAMILY PYP-like sensor domain (PAS domain) 10 92 IPR035965 -
Gma05g01029 337 SUPERFAMILY DNA-binding pseudobarrel domain 280 316 IPR015300 -
Gma05g01029 337 CDD PAS 21 94 IPR000014 -
Gma05g01029 337 Gene3D - 284 330 IPR015300 -
Gma05g01029 337 PANTHER PROTEIN TWIN LOV 1 6 99 - -
Gma05g01029 337 PANTHER PROTEIN TWIN LOV 1 93 181 - -
Gma05g01029 337 Gene3D PAS domain 5 57 - -
Gma05g01029 337 Gene3D PAS domain 58 111 - -
Gma05g01029 337 PANTHER PROTEIN TWIN LOV 1 6 99 - -
Gma05g01029 337 PANTHER PROTEIN TWIN LOV 1 93 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01029 Gma-Chr5 29586824 29594930 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01029 6 95 AGC Kinase Gene Family AT3G45780 29.524 1.36e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01029 - - gmx:100799855 264.233