Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01028 ATGAACTTGGGCTCATTGGAGAAGTCAAGGAGGGATCAACTTGGACGAAGGTGGAAAGTTTGGGTTCCAACCCCCTCGGTTGCATCGTCGCCTTTACCGTCGCACCTCAGCTACCCGGACTTCGTGGGCGGCGACACACACATCATCGTGTCTGAACATGCTGCCTCACTCGTAGACCTTTCCATGTGCCTCTCGAAAACTTTCCTGAAAGGAAGACCCTTCACGCTCAAGTACCAACTTCCCAATGAGGACCTCGATTCCCTCATCTTTGTCACCACCAACAAGGACCTCGAGAACATGACCGTCAAACCCTCCCGAATCCACCTCTTCCTCTTCCCCACCAAACTTGAATCCACTCACTCTATCCTTCCCCAAATTCATGACACGTTAGCTAAATCAGATGATTGGTTTTTGAATGCGTTAAATGACATCGTTTAG 438 0.4977 MNLGSLEKSRRDQLGRRWKVWVPTPSVASSPLPSHLSYPDFVGGDTHIIVSEHAASLVDLSMCLSKTFLKGRPFTLKYQLPNEDLDSLIFVTTNKDLENMTVKPSRIHLFLFPTKLESTHSILPQIHDTLAKSDDWFLNALNDIV 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01028 145 PANTHER EXPRESSED PROTEIN 41 142 - -
Gma05g01028 145 SUPERFAMILY CAD & PB1 domains 41 118 - -
Gma05g01028 145 SMART PB1_new 31 112 IPR000270 GO:0005515
Gma05g01028 145 PANTHER OS05G0427100 PROTEIN-RELATED 41 142 - -
Gma05g01028 145 Pfam PB1 domain 41 103 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01028 Gma-Chr5 29582621 29583213 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01028 41 100 MAP Kinase Kinase Kinase AT2G35050 43.333 1.79e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01028 - - gmx:100775954 167.548