Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01018 ATGGTATACAATAAAGACACAAATTGTGAATCGGTTGTGACGAGAGGTCAGCAGCACAATTTGATAACTCAACATCCCCCACTGGATGCAAGTCCTGCAGGGCTTTTGTCCATTGCAGAAGAGACTTTAGCAGAATTTCTTTCTAAGGCTACTGGGACTGCTGTTGAGTGGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCATGGTTGCACAGGTGTGGCAGCTAGAGCCTGTGGTCTAGTGGGACTAGAACTCACTAGGGTTGCAAAAATCCTCAAAGATCAGCCTTTGTGGTTTCACGATTGTCGATCTGTTGATGTTCTCAATGTGCTCTCCACAACAAATGGTGGAACCATTGAGATGCTTTATATGCAGAGGTCTCTTAAAAATACTCAAAATGGTCCAAGCATGCCTCTCGTGAAGCATTTTGTTAGAGCTGAGATGCTGCCTAATGGGTGCCTGATCAGACCATGTGAAGGAGGTGGTTCCATCATCCACATTGTTGATCATATGGATTTAGAGCCATGGAGTGTGCCAGAGGTGCTACGTCCATTGTACGAATCATCAACAGTACTGGCTCAGAAGACAACTATGGCAGCCCTACGTCATCTAAGGCAGATTTCACATGAAGTTTCTCAGTCCAACGTCACTGCGGGTTTTAATGTGGCACTCAATGGGTTTACTGATGAGGGATGGACAACAATTGGCAATGATGGTGTAGATGATGTTACTATTCTAGTGAATTCATCCCCGGACAAGTTAATGGGTCTGAATCTTTCCTTTGCCAATGGATTTCCATCTGTCAGTAATGCAGTGCTATGTGCCAAAGCATCGATGCTATTACAGGTTTTGGGTCTCTACGAGAAAAGAGAAAGCTACGATGCGAAGAACATTTCTCTCACCTCAGACATTATTGTTTCGCAAATTGAGAGGAAGAAGTGA 948 0.4441 MVYNKDTNCESVVTRGQQHNLITQHPPLDASPAGLLSIAEETLAEFLSKATGTAVEWPGPDSIGIVAISHGCTGVAARACGLVGLELTRVAKILKDQPLWFHDCRSVDVLNVLSTTNGGTIEMLYMQRSLKNTQNGPSMPLVKHFVRAEMLPNGCLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRHLRQISHEVSQSNVTAGFNVALNGFTDEGWTTIGNDGVDDVTILVNSSPDKLMGLNLSFANGFPSVSNAVLCAKASMLLQVLGLYEKRESYDAKNISLTSDIIVSQIERKK 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01018 315 PANTHER CLASS III HD-ZIP PROTEIN CNA1 4 127 - -
Gma05g01018 315 SMART START_1 37 209 IPR002913 GO:0008289
Gma05g01018 315 SUPERFAMILY Bet v1-like 37 209 - -
Gma05g01018 315 PANTHER CLASS III HD-ZIP PROTEIN CNA1 127 285 - -
Gma05g01018 315 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 127 285 IPR044830 GO:0003700
Gma05g01018 315 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 4 127 IPR044830 GO:0003700
Gma05g01018 315 Pfam START domain 126 208 IPR002913 GO:0008289
Gma05g01018 315 Pfam START domain 38 123 IPR002913 GO:0008289
Gma05g01018 315 Gene3D - 86 215 IPR023393 -
Gma05g01018 315 ProSiteProfiles START domain profile. 137 204 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01018 Gma-Chr5 29402609 29410287 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01018 5 300 Homeobox Transcription Factor Family AT1G52150 63.611 1.77e-145 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01018 K09338 - gmx:100819365 499.59