Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01017 ATGTATGAATACAACATGGTGTCCAATGAGGAAGAAGACTCATTCAGCTACACAACCCCAAATGGTGTATCACAATGGGTGTTATTTCACAATGGTCAGCTAAAGGACACAACTAGGGGAAGTGAGATTGCTAGAGCTGACACATGTTATGGCTACAACACCGATGGTGGTTGCCAGAGATGGGAACAACCCACATGTAGGAAGAAATCAGATCAAAGAGATATGAAGAAGTTGATTCGTGTTCATTTTGCTGCAGCAGTAGTGTCACTTGTAATTGTCATTACCTCCATTGGCATTTTCTTCAAAATATTAAGGAGAAGAAAATCTGCACTGAAAGTAAAGAAGAGGCGTGATTCAAAAGTCTTCAGCTATGCATCAATCATTGCCATGACAAATAGGTTCTCTGTAGAAAACAAGTTAGGAGAAGGGGGTTTTGGACTAGTATACAAGGGAAAATTGCCAACAGGAGAAGATATGGCAATAAAAAGGCTATCAAAAGGTTCAGGGCAAGGAGCTATAGAGTTCAAAAATGAGTTAAACCTCATATCTGAACTCCAACACATGAATGTTATTCAGATATTGGGTTGTTGCATCCATGGAGAAGAGAGGATGTTAATCTATGAGTACATGGCTAACAACAACTTGGACTTCTTTTTATTTGATCGCAATAGAAGAATGCTACTAGATTGGAAGAGACATTTCAACATAATTGAAGGAATTGCTCAAGGATTGCTCTATCTCCATAAGTATTCAAGATTGAAAGCAGTTCACAGAGATTTGAAAGCTAGTAACATACTTCTTGATGAAAACATGAATCCTAAAATTTCAGATTTTGGCACGGCAAGAATTTTCAGCCCTCAAGAATCATAA 870 0.3805 MYEYNMVSNEEEDSFSYTTPNGVSQWVLFHNGQLKDTTRGSEIARADTCYGYNTDGGCQRWEQPTCRKKSDQRDMKKLIRVHFAAAVVSLVIVITSIGIFFKILRRRKSALKVKKRRDSKVFSYASIIAMTNRFSVENKLGEGGFGLVYKGKLPTGEDMAIKRLSKGSGQGAIEFKNELNLISELQHMNVIQILGCCIHGEERMLIYEYMANNNLDFFLFDRNRRMLLDWKRHFNIIEGIAQGLLYLHKYSRLKAVHRDLKASNILLDENMNPKISDFGTARIFSPQES 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01017 289 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 11 75 - -
Gma05g01017 289 ProSiteProfiles Protein kinase domain profile. 134 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g01017 289 SUPERFAMILY Protein kinase-like (PK-like) 117 287 IPR011009 -
Gma05g01017 289 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 11 75 - -
Gma05g01017 289 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 113 289 - -
Gma05g01017 289 SMART serkin_6 134 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g01017 289 ProSitePatterns Protein kinases ATP-binding region signature. 140 162 IPR017441 GO:0005524
Gma05g01017 289 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 113 289 - -
Gma05g01017 289 Pfam Protein tyrosine and serine/threonine kinase 136 284 IPR001245 GO:0004672|GO:0006468
Gma05g01017 289 Gene3D Phosphorylase Kinase; domain 1 98 209 - -
Gma05g01017 289 Gene3D Transferase(Phosphotransferase) domain 1 210 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01017 Gma-Chr5 29400283 29402364 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01017 83 289 Receptor kinase-like Gene Family AT4G23190 52.727 3.02e-72 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma05g01017 PK_Tyr_Ser-Thr 3.6e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01017 - - gmx:102666068 532.332