Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01015 ATGAAGATTTGTAGTCTCAGCTGGCCAATTCCAAGTCAAATAAGAACTAGATGGACAAGGCTTGAGAACCTGAATCTAGCAAGAACTCTAACAAGAGAGGCAAGTTTGAGTGTACCACTTGCAACAAAATTTTCCACTCATACCAAGCTTGGAGGCCATAGAGCTAGCCACAAGAAGATCAAAGGATGCTTTGCTTCAAGGAATGAAAGCAGTGAGAGCAGTGAGTGTGTGGTGGAACATCAACATGGTGCTAGTTTTCATAATGAGGTGGAAACAGTTAATGAGTCCAAGAAGAGCAAGGGGCATGAGTGCCCAATTTGCCTAAAGGTTTTTCCATGTGGCCAAGCCTTGGGTGGCCATAAGAGATCTCATATGGTTGGTGGGTCTAAGAGTAGAAGCTTTCAAACAATTGTGCTTCAGGAACCAGTGGTAGAAATTAGGGACTTCCTTGATCTTAATCTTCTTGCTGCTACTAAGGAAGAAAACAATAGCCATGCTGACTCTAACAGTAACAGACCCTGGTGGATAGTAGAAGACAACCACAAACAGGAGGCACTGGTAGGTCTTATCTCATAG 576 0.434 MKICSLSWPIPSQIRTRWTRLENLNLARTLTREASLSVPLATKFSTHTKLGGHRASHKKIKGCFASRNESSESSECVVEHQHGASFHNEVETVNESKKSKGHECPICLKVFPCGQALGGHKRSHMVGGSKSRSFQTIVLQEPVVEIRDFLDLNLLAATKEENNSHADSNSNRPWWIVEDNHKQEALVGLIS 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01015 191 Pfam C2H2-type zinc finger 102 125 - -
Gma05g01015 191 PANTHER C2H2-TYPE ZINC FINGER PROTEIN 43 191 - -
Gma05g01015 191 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 43 191 - -
Gma05g01015 191 ProSiteProfiles Zinc finger C2H2 type domain profile. 102 124 IPR013087 -
Gma05g01015 191 ProSitePatterns Zinc finger C2H2 type domain signature. 104 124 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01015 Gma-Chr5 29318663 29319821 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01015 44 164 C2H2 Transcription Factor Family AT2G45120 40.323 1.78e-18 79.7