LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma05g01011	ATGACCTTCATAAGGGAGGAATATGATCAAGTTGATGATCATGGATCACAAAACAATGCCAACAACAACACTGAAATTGTGACCACCCCAGAAGGGGAAAACATGGGAGAATGGCTTAGTCTAGGCCTCACAGGAGACATCAACATGCCTGTAGAAGCAGCAGCAGAACAAAACTTATCATCAAGGCCTCTCCACAACAAGGAATTCTCATGCAACTTCTGCATGAGAAAGTTTTACAGCTCACAAGCCTTAGGGGGTCACCAGAATGCACACAAGAGGGAGAGAGAAGCTGCTAGAAGCTACCACCAATCTCATCATCACAGAATGGGGCTTGCTTACACTTCTCTGGCATCTAGGTCACTGGGAATTCAGCCTCACTCTCTTGTGCACAAACCTAACAGAGAAAGGTCTGCTATGGTGGCTAGATTCAGTAGTAATGATGCCAATAATGGGGTTGGAATTGGATCAGTGGCATCATCATGGACACCCTTTATGCTTGAACAAGCTGTGGATTTGTATTGGCCAGATAAATGA	534	0.4494	MTFIREEYDQVDDHGSQNNANNNTEIVTTPEGENMGEWLSLGLTGDINMPVEAAAEQNLSSRPLHNKEFSCNFCMRKFYSSQALGGHQNAHKREREAARSYHQSHHHRMGLAYTSLASRSLGIQPHSLVHKPNRERSAMVARFSSNDANNGVGIGSVASSWTPFMLEQAVDLYWPDK	177

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma05g01011	177	Gene3D	Classic Zinc Finger	54	119	-	-
	Gma05g01011	177	PANTHER	ZINC FINGER PROTEIN 4-LIKE	1	175	-	-
	Gma05g01011	177	ProSiteProfiles	Zinc finger C2H2 type domain profile.	69	96	IPR013087	-
	Gma05g01011	177	ProSitePatterns	Zinc finger C2H2 type domain signature.	71	91	IPR013087	-
	Gma05g01011	177	SUPERFAMILY	beta-beta-alpha zinc fingers	65	96	IPR036236	-
	Gma05g01011	177	MobiDBLite	consensus disorder prediction	1	23	-	-
	Gma05g01011	177	PANTHER	ZINC FINGER PROTEIN 4-LIKE	1	175	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma05g01011	Gma-Chr5	29246615	29247906	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma05g01011	67	143	C2H2 Transcription Factor Family	AT1G24625	55.422	3.99e-18	76.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma05g01011	-		-	gmx:100795890	364.77

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma17g01527	17	15329803	15331072	Gma05g01011	05	29246615	29247906	GST