Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01002 ATGGAAAAAGGGCCACTCTGGGACCATTTGTACAATACAAACTTGCCAAGCTTGTCTTGGAATCAAAGGCTTGGAATTTGCATTGGAGCTGCCAAGGGTCTTCATTACCTTCACAAAGGAGTAGTGGTACGGGGAATCATTCACCATGATGTGAAGTCCTCGAACTTATTGCTTGATGAGAACCATGTTGCTAAAGTTGCTGATTTTGGCCTTTCAAGGACAGGTCCTCTTGATCATCAATCATATGTCAGCACCGGTGTTAAAGGCACTTTGGGGTATCTTGAACCTGAATATTTAAGGTGGCAAAAGCTCACAGAAAAATCTGATGTCTAtattaaaattaatgtctcatga 354 0.4011 MEKGPLWDHLYNTNLPSLSWNQRLGICIGAAKGLHYLHKGVVVRGIIHHDVKSSNLLLDENHVAKVADFGLSRTGPLDHQSYVSTGVKGTLGYLEPEYLRWQKLTEKSDVYIKINVS 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01002 117 Pfam Protein tyrosine and serine/threonine kinase 1 111 IPR001245 GO:0004672|GO:0006468
Gma05g01002 117 ProSiteProfiles Protein kinase domain profile. 1 117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g01002 117 PANTHER OS07G0166700 PROTEIN 1 111 IPR045272 GO:0004714|GO:0006468
Gma05g01002 117 SUPERFAMILY Protein kinase-like (PK-like) 1 111 IPR011009 -
Gma05g01002 117 Gene3D Transferase(Phosphotransferase) domain 1 1 112 - -
Gma05g01002 117 PANTHER BNAC03G27170D PROTEIN 1 111 - -
Gma05g01002 117 ProSitePatterns Serine/Threonine protein kinases active-site signature. 46 58 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01002 Gma-Chr5 29020620 29020973 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01002 1 111 Receptor kinase-like Gene Family AT2G39360 67.857 2.11e-46 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gma05g01002 PK_Tyr_Ser-Thr 7.1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01002 - - lja:Lj0g3v0255909.1 181.03