Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00994 ATGATGATACTTGGCTTTCTTTGGCGTCTTAAAATAACGAAGGAAAAACCCACTGAGAATTCAGACTGGTTGCCAATACTCGTTACTGCTGGAGGGAGTTCTCAAAGTAGATTGACTGAGGGAACCAGTCAAGGCTCTGCTCTTCCCAACATAAACCTTGGTCTGAAAATTCCATTGCTTGATCTTCAATTGGCAACCAATAACTTCCATGCAAGTCAGAAAATTGGAAAGGGTAGTTTTGGCAACGTCTATAAAGGCGTTCTCCAGAATGGCATGACAGTCGCTATGAAAAGAGGTGAGCCAGGGTCGGGTGAAGGCCTTCTAGAATTTCACACTGAGATCGTGATTTTGTCCAAGATTCATCACAAGCACCTTGTTTCCTTAATAGGGTATTGTGATGAAAACTTTGAGATGATACTGGTTTATGAGTACATGGAAAAAGGAACACTCAGAGACCATTTGTCCAATAAAAACTTGCCAAGGTTGTCTTGGAAGAATTGGCTTGAAATTTGCATTGGAGCTTCCAGTGGTCTTCATTACCTTCACAAAGGAGCGGATGGGGGGATCATTCACCGTGATGTAAAGTCTACAAACATATTGCTTGATGAGAACCTTGTAGCCAAAGTTGCTGACTTTGGTCTTTCAAGGACTGGTCCTGTTGATCATCAACCATATGTAACCACTGTTGTTAAAGGCACTTTCGGGTATCTTGATCCTGAGTATTTCAAGATGCAACAGCTGACAGAAAAATCTGATGTATATTCATTTGGGGTCATTCTTTTGGAAGTGTTGTGTGCAAGAGCAGTGATTGACCCATCGCTTCCAAGAGACCAGATAAACTCGGCTCAATGGGGAGTACTTTGCAAAAATAAGGGGATGCTCCAAGATATTGTTGACCCTTCCATTAAGGACCAAATAGATCAAAACTCGCTCAGAAAATTTAGTGAGACAGTAGAAAAATCCTTGCAAGAAGATGGTTCTGATAGGCCAACCATGGATGCTTTGTTGTGGGACTTGGAGTATGCGCTGCAGCTTCAGAGAGGTGCAAATGCAATACATAGAGTGCAGCATGAGGATAGTTCTACTAGTGTTTTTGCATCACTTCAATTGCTCAATGTTCGGCGTCTTCCATCACTCTCCACGCTAAGTGAAGTGGCTGAATCTGCTATTGTGACCGGTAATGTGTCCAATTGTGCTGCGGATTCTGTTTTCTCTTTATTGAAAATTGATGATGCCAGATAG 1242 0.4219 MMILGFLWRLKITKEKPTENSDWLPILVTAGGSSQSRLTEGTSQGSALPNINLGLKIPLLDLQLATNNFHASQKIGKGSFGNVYKGVLQNGMTVAMKRGEPGSGEGLLEFHTEIVILSKIHHKHLVSLIGYCDENFEMILVYEYMEKGTLRDHLSNKNLPRLSWKNWLEICIGASSGLHYLHKGADGGIIHRDVKSTNILLDENLVAKVADFGLSRTGPVDHQPYVTTVVKGTFGYLDPEYFKMQQLTEKSDVYSFGVILLEVLCARAVIDPSLPRDQINSAQWGVLCKNKGMLQDIVDPSIKDQIDQNSLRKFSETVEKSLQEDGSDRPTMDALLWDLEYALQLQRGANAIHRVQHEDSSTSVFASLQLLNVRRLPSLSTLSEVAESAIVTGNVSNCAADSVFSLLKIDDAR 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00994 413 SUPERFAMILY Protein kinase-like (PK-like) 52 340 IPR011009 -
Gma05g00994 413 SMART serkin_6 69 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g00994 413 ProSiteProfiles Protein kinase domain profile. 69 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g00994 413 PANTHER BNAC03G27170D PROTEIN 11 367 - -
Gma05g00994 413 Gene3D Transferase(Phosphotransferase) domain 1 145 363 - -
Gma05g00994 413 PANTHER OS07G0166700 PROTEIN 11 367 IPR045272 GO:0004714|GO:0006468
Gma05g00994 413 Gene3D Phosphorylase Kinase; domain 1 32 144 - -
Gma05g00994 413 Pfam Protein tyrosine and serine/threonine kinase 70 336 IPR001245 GO:0004672|GO:0006468
Gma05g00994 413 ProSitePatterns Protein kinases ATP-binding region signature. 75 97 IPR017441 GO:0005524
Gma05g00994 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00994 Gma-Chr5 28876333 28877574 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00994 1 413 Receptor kinase-like Gene Family AT2G23200 51.551 2.91e-137 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gma05g00994 PK_Tyr_Ser-Thr 3.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00994 - - gmx:100789555 760.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01533 17 15415013 15418019 Gma05g00994 05 28876333 28877574 GST