Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00992 ATGTCAAGACAAAATACAAGCTTGGACCTTGTGAAACTGTTCATGTCTCTAGAGATATATTTGCACTCTATTGCCTTGCCATTAGGCTGTGACAAGGTTTACGTTGGTGAATCAAATCCTGTAGCCCGTTTTAGCAGAAGCAAAACAGAGAGCAATGAATCACAAGTTCCTTCTCCTCTCTACCAAACAGCGAGAATTTTTCAACGTGAGTCTTCATATGAGTTCGGTATCGACACAAATGGCACCTATCTGGTACGCCTCCATTTCTTCTCTTTCACTTCCCGGAGTAATCTTTACTCGGCCAGGTTCAACATCTCGGTTCCTGGGTTCTGGTTGGTCCAAAGATTTGATGCCAGAAATGATACCGAAAACAACGTTGAACCGGTAAAAGAGTTTTTCATGGAAATCACTTCCCCCACCTTCAAAATTATTTTCAGACCTCTGCCATCATCATTTGCATTTGTGAATGCTATTGAACTCTTCCTACTCCCTCCCAATTTGATTAGCAATAATGTCTCGCGTTTCACTTATAGTGGTTACCAAGTACGCTTAACTGATTACGGACCAGGTTTGTATTCTCGCGTGTTGGAGACCAAACTTAGGCTTAATGTGGGTGGCCAAATTGTCACTGGTCCAGATAACTTATTGAGAAAGTGGTTTCCAGATGATAGTTATCTTGCAAATCCAGAAAATGCCAAGAATCGTTCCCCTTTCGTGGTTCGAATTGAGTACCATGTAGGTGATGACTCAGATGGTCCAAACGCAAATAAATTTACCGCGCCAAGTGATGTGTACAGAACTGCTAAAGAGATTAATAGCAGCTCTTCCAGTGCTGGAAACATAACATGGGCTCTTCCCGTGGACTACAACACAGATCATCTTCTTCGGCTTCACTTCTATGACTATTGGAGTCCACAAATTGATCATAACTTCAGTCTGTTCATTTACGACACCTATGTCATGCCCGAAAATATTGATGACCCAGAAGTGTCTAAGGAGTTGCCAGCCCCTTATTATTATGATTTTGTGGTACACTCTGATGACTCTGGGTTTATGAAGGTCAGCATAGCACCTGATGCATCCGCTCGCATTCGTGATGCGTTTTTAAACGGGCTAGAAATAATGAAAATAATTGAGAGATCAAGTTCTGTTCCTCCTTACCTGGGCGAACCCAATTCTGAGCACAATCGTCTTCCAGTGGTGCTAGGTTTAATTCTTGAAGGTTCAGTCCTGATTATTTTTATGATGATACTTGGCTTTCTTTGGCGTCTTAAAATAACAAAGGAAAAACCCACTGAGAATTCAGACTGGTTGCCAATGCTCGTTACTGCTGGAGGGAGTTCTCAAAGTAGATTGACTGAGGGAACCAGTCAAGGCTCTGCTCTTCCCAACATAAATCTTGGTCTGAAAATTCCATTGCTTGATCTTCAATTGGCAACCAATAACTTCCATGCAAGTCAGATAATTGGAAAGGGTAGTTTTGGCAACGTCTATAAAGGGGTTCTTCAGAATGGCATGACAGTCGCTGTGAAAAGAGGTGAGCCGGGGTCGGGTGAAGGCCTTCCAGAATTTCACACCGAGATCGTGATTTTGTCCAAGATTCGTCACAAGCACCTTGTTTCCTTAATTGGGTATTGTGATGAAAACTTTGAGATGATACTGGTTTATGAGTACATGGAAAAAGGAACACTCAGAGACCATTTGTCCAATAAAAACTTGCCAAGGTTGTCTTGGAAGAATAGGCTTGAAATTTGCATTGGAGCTGCCAGTGGTCTTCATTACCTTCACAAAGGAGTGGATGGGGGGATCATTCACCGTGATGTAAAGTCTACAAACATATTGCTTGATGAGAACCTTGTAGCCAAAGTTGCTGACTTTGGTCTTTCAAGGACTGGTCCTGTTGATCATCAACCATATGTAACCACTGTTGTTAAAGGCACTTTCGGGTATCTTGATCCTGAGTATTTCAAGACGCAACAGCTGACAGAAAAATCTGATGTATATTCATTTGGGGTCGTTCTTTTGGGAGTGTTGTGTGCAAGAGCAGTGATTGACCCATCGCTTCCAAGAGACCAGATAAACTTGGCTGAATGGGGAATACTTTGCAAAAATAAGGGGATGCTCCAAGATATTGTTGACCCTTCCATTTAG 2151 0.4226 MSRQNTSLDLVKLFMSLEIYLHSIALPLGCDKVYVGESNPVARFSRSKTESNESQVPSPLYQTARIFQRESSYEFGIDTNGTYLVRLHFFSFTSRSNLYSARFNISVPGFWLVQRFDARNDTENNVEPVKEFFMEITSPTFKIIFRPLPSSFAFVNAIELFLLPPNLISNNVSRFTYSGYQVRLTDYGPGLYSRVLETKLRLNVGGQIVTGPDNLLRKWFPDDSYLANPENAKNRSPFVVRIEYHVGDDSDGPNANKFTAPSDVYRTAKEINSSSSSAGNITWALPVDYNTDHLLRLHFYDYWSPQIDHNFSLFIYDTYVMPENIDDPEVSKELPAPYYYDFVVHSDDSGFMKVSIAPDASARIRDAFLNGLEIMKIIERSSSVPPYLGEPNSEHNRLPVVLGLILEGSVLIIFMMILGFLWRLKITKEKPTENSDWLPMLVTAGGSSQSRLTEGTSQGSALPNINLGLKIPLLDLQLATNNFHASQIIGKGSFGNVYKGVLQNGMTVAVKRGEPGSGEGLPEFHTEIVILSKIRHKHLVSLIGYCDENFEMILVYEYMEKGTLRDHLSNKNLPRLSWKNRLEICIGAASGLHYLHKGVDGGIIHRDVKSTNILLDENLVAKVADFGLSRTGPVDHQPYVTTVVKGTFGYLDPEYFKTQQLTEKSDVYSFGVVLLGVLCARAVIDPSLPRDQINLAEWGILCKNKGMLQDIVDPSI 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00992 716 Gene3D - 30 162 - -
Gma05g00992 716 Gene3D - 196 378 - -
Gma05g00992 716 PANTHER OS07G0166700 PROTEIN 51 716 IPR045272 GO:0004714|GO:0006468
Gma05g00992 716 ProSitePatterns Serine/Threonine protein kinases active-site signature. 603 615 IPR008271 GO:0004672|GO:0006468
Gma05g00992 716 Gene3D Transferase(Phosphotransferase) domain 1 559 716 - -
Gma05g00992 716 SMART serkin_6 483 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g00992 716 PANTHER BNAC03G27170D PROTEIN 51 716 - -
Gma05g00992 716 Pfam Protein tyrosine and serine/threonine kinase 485 678 IPR001245 GO:0004672|GO:0006468
Gma05g00992 716 SUPERFAMILY Protein kinase-like (PK-like) 466 699 IPR011009 -
Gma05g00992 716 ProSitePatterns Protein kinases ATP-binding region signature. 489 511 IPR017441 GO:0005524
Gma05g00992 716 Pfam Malectin-like domain 51 377 IPR024788 -
Gma05g00992 716 ProSiteProfiles Protein kinase domain profile. 483 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g00992 716 Gene3D Phosphorylase Kinase; domain 1 447 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00992 Gma-Chr5 28842712 28845421 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00992 32 716 Receptor kinase-like Gene Family AT2G23200 43.362 6.36e-168 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gma05g00992 Malectin_like 1.1e-23 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00992 - - gmx:100789555 1309.28