Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00989 ATGGCGATTGCTATGCTCCATAGAATTCAACACTTTCTGTGCCTAATACTTGTTTTTCTTCTTCCATTCTCATCACTGTTGTTCCCGTCACTCGGATACAACGTCCCAGATAAGTATTTTATCAATTGTGGGTCTGATAGCAATGTTACCGTAGGTAACAAGGTTTACGTTGGTGAATCAAACCCTGTAGCCCGTTTTAGCAGAAGCAAAACAGAGAGCAATGAATCACAGGTGCCTTCTCCTCTCTACCAAACAGCAAGGATTTTTCGACGTGAGTCCTCATATGAGTTCGGTATCGACACAAATGGCACCTATCTGGTACGCCTCCATTTCTTCTCTTTCACTTCCCGGAGTAATCTTTACTCGGCCAGGTTCAACATCTCGGTTCCTGGGTTCTGGTTGGTCCAAAGATTTGATGCCAGAAATGATACCGAAAACAACGCTGAACCGGTAAAAGAGTTTTTCATGGAAATCACTTCCCCCACCTTCAAAATTATTTTCAGACCTCTGCCATCATCATTTGCATTTGTGAATGCTATTGAACTCTTCCTACTCCCTCCCAATTTGATTAGCAATAATGTCTCGCGTTTCACTTATAGTGGTTACCAAGTACGCTTAACTAATTACGGACCAGGTTTGTATTCTCGCGTGTTGGAGACCAAACTTAGGCTTAATGTGGGTGGCCAAATTGTCACTGGTCCAGATAACTTATTGAGAAAGTGGTTTCCAGATGATAGTTATCTTGCAAATCCAGAAAATGCCAAGAATCGTTCCCCTTTCGTGGGTCGAATTGAGTACCATGTAGGTGATGACTCAGATGGTCCAAACGCAAATAAATTTACCGCGCCAAGTGATGTGTACAGAACTGCTAAAGAGATTAATAGCAGCTCTTCCAGTGCTGGAAACATAACATGGGCTCTTCCCGTGGACTACAACACAGATCATCTTCTTCGGCTTCACTTCTGTGACTGTTGGAGTCCACAAATTAATCTTACATACTTCAATCTGTCCATTTACGACACCTATGTCATGCACGTAAATGACGATTACTGGGACGTGTCTAAGGAGTTGCCAGCCCCTTATTATTATGATATTGTTGTACACTCTGATGACTCCGGGTTTATGAAGGTCAGCATAGCACCTGATGCATCCGCTCCCATACCTAATGCATTTTTAAACGGGCTAGAAATAATGAAAATAATTGAGAGATCAAGTTCTGTTCCTCCTTACCTGGGCGAACCCAATTCTGAGCACAATCGTCTTCCTGTGGTGCTAGGTTCAATTCTTGGAGGTTCACTCCTGATTATTTTTATGATGATACTTGGCTTTCTTTGGCGTCTTAAAATAACGAAGGAAAAACCCACTGAGAATTCAGACTGGTTGCCAATGCTCGTTACTGCTGGAGGGAGTTCTCAAAGTAGATTGACTGAGGGAACCAGTCAAGGCTCTGCTCTTCCCAACATAAACCTTGGTCTGAAAATTCCATTGCTTGATCTTCAATTGGCAACCAATAACTTCCATGCAAGTCAGATAATTGGAAAGGGTAGTTTTGGCAACGTCTATAAAGGGGTTCTCCAGAATGGCATGACAGTCGCTGTGAAAAGAGGTGAGCCAGGGTCGGGTGAAGGCCTTCCAGAATTTCACACCGAGATCGTGATTTTGTCCAAGATTCGTCACAAGCACCTTGTTTCCTTAATTGGGTATTGTGATGAAAACTTTGAGATGATACTGGTTTATGAGTACATGGAAAAAGGAACACTCAGAGACCATTTGTCCAATAAAAACTTGCCAAGGTTGTCTTGGAAGAATAGGCTTGAAATTTGCATTGGAGCTGCCAGTGGTCTTCATTACCTTCACAAAGGAGTGGATGGGGGGATCATTCACCGTGATGTAAAGTCTACAAACATATTGCTTGATGAGAACCTTGTAGCCAAAGTTGCTGACTTTGGTCTTTCAAGGACTGGTCCTGTTGATCATCAACCATATGTAACCACTGTTGTTAAAGGCACTTTCGGGTATCTTGATCCTGAGTATTTCAAGACGCAACAGCTGACAGAAAAATCTGATGTATATTCATTTGGGGTCGTTCTTTTGGAAGTGTTGTGTGCAAGAGCAGTGATTGACCCATCGCTTCCAAGAGACCAGATAAACTTGGCTGAATGGGGAATACTCTGCAAAAATAAGGGGATGCTCCAAGATATTGTTGACCCTTCCATTAAGGACCAAATAGATCAAAACTCGCTCAGAAAATTTAGTGAGACAGTAGAAAAATCCTTGCAAGAAGATGGTTCTGATAGGCCAACCATGGATGCTTTGTTGTGGGACTTGGAGTATGCGCTGCAGATTCAGAGAGGTGCAAATGCAATACATAGAGTGCAGGATGAGGATAGTTCTATTAGTGTTTCTACATCACTTCAATTGCCCAGTGTTCGGCGTCTTCCATCACTCTCCACACTAAGTGAAGTGGCTGAATTTGCTATTGTGACCGGTAATGAGTCCAATTGTGCTGCGGATTCTGTTTTCTCTTTATTGAAAATTGATGACGCCAGATAG 2553 0.4262 MAIAMLHRIQHFLCLILVFLLPFSSLLFPSLGYNVPDKYFINCGSDSNVTVGNKVYVGESNPVARFSRSKTESNESQVPSPLYQTARIFRRESSYEFGIDTNGTYLVRLHFFSFTSRSNLYSARFNISVPGFWLVQRFDARNDTENNAEPVKEFFMEITSPTFKIIFRPLPSSFAFVNAIELFLLPPNLISNNVSRFTYSGYQVRLTNYGPGLYSRVLETKLRLNVGGQIVTGPDNLLRKWFPDDSYLANPENAKNRSPFVGRIEYHVGDDSDGPNANKFTAPSDVYRTAKEINSSSSSAGNITWALPVDYNTDHLLRLHFCDCWSPQINLTYFNLSIYDTYVMHVNDDYWDVSKELPAPYYYDIVVHSDDSGFMKVSIAPDASAPIPNAFLNGLEIMKIIERSSSVPPYLGEPNSEHNRLPVVLGSILGGSLLIIFMMILGFLWRLKITKEKPTENSDWLPMLVTAGGSSQSRLTEGTSQGSALPNINLGLKIPLLDLQLATNNFHASQIIGKGSFGNVYKGVLQNGMTVAVKRGEPGSGEGLPEFHTEIVILSKIRHKHLVSLIGYCDENFEMILVYEYMEKGTLRDHLSNKNLPRLSWKNRLEICIGAASGLHYLHKGVDGGIIHRDVKSTNILLDENLVAKVADFGLSRTGPVDHQPYVTTVVKGTFGYLDPEYFKTQQLTEKSDVYSFGVVLLEVLCARAVIDPSLPRDQINLAEWGILCKNKGMLQDIVDPSIKDQIDQNSLRKFSETVEKSLQEDGSDRPTMDALLWDLEYALQIQRGANAIHRVQDEDSSISVSTSLQLPSVRRLPSLSTLSEVAEFAIVTGNESNCAADSVFSLLKIDDAR 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00989 850 Pfam Protein tyrosine and serine/threonine kinase 508 773 IPR001245 GO:0004672|GO:0006468
Gma05g00989 850 ProSitePatterns Protein kinases ATP-binding region signature. 512 534 IPR017441 GO:0005524
Gma05g00989 850 SMART serkin_6 506 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g00989 850 Gene3D - 38 184 - -
Gma05g00989 850 Gene3D - 218 401 - -
Gma05g00989 850 PANTHER OS07G0166700 PROTEIN 30 803 IPR045272 GO:0004714|GO:0006468
Gma05g00989 850 Gene3D Phosphorylase Kinase; domain 1 470 581 - -
Gma05g00989 850 Gene3D Transferase(Phosphotransferase) domain 1 582 801 - -
Gma05g00989 850 SUPERFAMILY Protein kinase-like (PK-like) 489 777 IPR011009 -
Gma05g00989 850 PANTHER BNAC03G27170D PROTEIN 30 803 - -
Gma05g00989 850 ProSiteProfiles Protein kinase domain profile. 506 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g00989 850 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Gma05g00989 850 CDD STKc_IRAK 512 777 - -
Gma05g00989 850 Pfam Malectin-like domain 41 400 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00989 Gma-Chr5 28808757 28811517 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00989 12 850 Receptor kinase-like Gene Family AT2G23200 42.710 0.0 604
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gma05g00989 Malectin_like 1.2e-24 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00989 - - gmx:100789555 1556.58