Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00979 ATGGAAGCAATTTCTTATTCAATCCCCTCCACCAAATTGCACTCCTCTCTTCATATTTACACGGGCGTTACACGAATTCGATCCTCTAACCACCTTCTTCGCCCTCCCCCTATTTCAATTAAACCTCTATATTCCCCCAATTTTCTCATTCTCCATCGCCACAGACTTCGCTGCGTCGCAGAATCCTCCAATAATCACCACCACAATCATCATCACGACCATGACCACGGTCACAACCACCACCATCACCATCACCACTCACACGGCATCCACGGCGCTGATCTCACCGGCCCTCAAAAAGCTGTCATCGCGTTCGCGAAAGCCACCAGATGGATGGACCTGGCAGACATCCTGAGGGAGCACCTGCATCTATGCTGCTTCTCCACCGCTCTATTCGTAGCCGCCGCAATTTGCCCTCACACCTTGCCTAAGCCACTTGTCAAGCCTCTTCAAAACTCTCTCATCTTCGTCGCCTTTCCTCTGGTTGGGGTTTCTGCATCACTTGACGCTCTCCTTGAAATCAGCAGTGGAAAGGTGAACATCCATGTGCTAATGGCAATGGCAGCCTTTGCGTCGATATTCATGGGAAACTCTTTGGAAGGAGGCTTGCTTCTTGCCATGTTTAACCTCGCGCATATCGCCGAAGAGTATTTCACCAGCCGGTCGATGGTTGATGTTAGGGAATTGAAGGAAAATAATCCAGATTTCGCCCTTGTTCTGGATACCAATGATGATAAACTCCCCAATACGTTTGACTTGGCGTACAAGAGGGTTCCCGTGCATGATGTAACTGTAGGATCATATATTCTGGTTGGCGCTGGTGAGTCTGTGCCAGTAGATTGTGAAGTATTCCAAGGAAGTGCCACAATTACCACCGAGCACTTGACAGGGGAAGTCAAACCTTTGGAAGCCAAAGTTGGAGATAGAATTCCTGGTGGTGCAAGGAACTTAGATGGGAGGATAATCGTGGAGGTAACCAAAACTTGGAAGGAATCAACTCTCAGCAGAATTGTTCAGTTGACTGAAGAAGCACAGTCAAATAAACCTAAACTTCAAAGGTGGCTTGATGAATTTGGTGAACGCTATAGCAAAGTTGTTGTGGTGTTATCAATTGCTATTGCTGTTATTGGGCCATTTTTATTTAAGTGGCCATTCATTAGTACATCTGCTTGCAGAGGTTCAATTTACAGAGCCTTAGGGCTTATGGTGGCAGCATCCCCTTGTGCCTTGGCTGTGGCCCCATTGGCATATGCTATAGCAATCAGCTCCTGTGCCAGAAAGGGGATATTACTCAAAGGTGGGCATGTTCTGGATGCTCTAGCTACTTGTCATACTGTTGCCTTTGACAAAACAGGGACATTGACAACTGGTGGACTCGTATTCAAGGCAATTGAGCCCATTTATGGTCATCATGTTAGAAACAATAAATCAAATGTTCCTTCCTGTTGCATTCCCACCTGTGAAAAAGAAGCTCTTGCTGTTGCTGCAGCTATGGAAAAGGGTACTACTCACCCTATTGGAAGGGCTGTGGTTGACCATAGTGAAGGCAAAGACCTCCCATCTATTTCTGTTGAAAGTTTCGAATACTTTCCTGGTAGAGGCCTTACTGCTACTGTTAACAGCATTGAGTCAGGAACTGGAGGTGCTAAACTATTGAAAGCATCACTTGGATCTATAGATTTCATCACCTCTTTTTGTCAATCTGAAGTCGAGTCAGAAAAGATCAAGGAAGCTGTTAATACATCTTCTTATGGAAGTGAATATGTTCATGCTGCCCTTTCAGTTAATCAGAAGGTAACATTGATTCATCTAGAGGATAGGCCTCGTCCTGGGGTTTCTAATGTTATTCAAGAATTGCAAGATGAAGCAAAGTTTCGTGTGATGATGTTAACTGGTGATCATGAGTCTAGTGCAAGGAGAGTTGCAAGTGCTGTGGGCATCAATGAGTTTCATTGCAACCTGAAGCCTGAAGACAAGCTGAGTCATGTAAAGGATATCTCAAGAGATATGGGGGGAGGCTTAATTATGGTTGGTGAAGGCATCAATGATGCCCCAGCACTAGCTGCTGCAACTGTTGGGATAGTTCTTGCTCACCGTGCTAGTGCAACTGCCATAGCTGTTGCAGATGTATTGTTGCTTAGAGAAAACATTTCTGCAGTGCCATTTTGTATTGCCAAGTCTCGTCAAACAACTTCACTGATTAAACAAAATGTGGCTTTAGCATTGACGTCCATTGTCATGGCTTCCCTTCCATCAGTTTTGGGATTTCTGCCATTGTGGTTAACGGTTCTTTTACATGAAGGTGGAACCTTGCTTGTCTGTCTTAATTCTGTACGTGCTCTGAATGAACCATCTTGGTCCTGGAAGCATGATATATCACATTTGATTAGCGAGATTAAATCTAGACTCCTCTCTCTCAAGACAAATATCACGGGCTCAAACAGTATCATGACGGCGAATTTGTAA 2466 0.4489 MEAISYSIPSTKLHSSLHIYTGVTRIRSSNHLLRPPPISIKPLYSPNFLILHRHRLRCVAESSNNHHHNHHHDHDHGHNHHHHHHHSHGIHGADLTGPQKAVIAFAKATRWMDLADILREHLHLCCFSTALFVAAAICPHTLPKPLVKPLQNSLIFVAFPLVGVSASLDALLEISSGKVNIHVLMAMAAFASIFMGNSLEGGLLLAMFNLAHIAEEYFTSRSMVDVRELKENNPDFALVLDTNDDKLPNTFDLAYKRVPVHDVTVGSYILVGAGESVPVDCEVFQGSATITTEHLTGEVKPLEAKVGDRIPGGARNLDGRIIVEVTKTWKESTLSRIVQLTEEAQSNKPKLQRWLDEFGERYSKVVVVLSIAIAVIGPFLFKWPFISTSACRGSIYRALGLMVAASPCALAVAPLAYAIAISSCARKGILLKGGHVLDALATCHTVAFDKTGTLTTGGLVFKAIEPIYGHHVRNNKSNVPSCCIPTCEKEALAVAAAMEKGTTHPIGRAVVDHSEGKDLPSISVESFEYFPGRGLTATVNSIESGTGGAKLLKASLGSIDFITSFCQSEVESEKIKEAVNTSSYGSEYVHAALSVNQKVTLIHLEDRPRPGVSNVIQELQDEAKFRVMMLTGDHESSARRVASAVGINEFHCNLKPEDKLSHVKDISRDMGGGLIMVGEGINDAPALAAATVGIVLAHRASATAIAVADVLLLRENISAVPFCIAKSRQTTSLIKQNVALALTSIVMASLPSVLGFLPLWLTVLLHEGGTLLVCLNSVRALNEPSWSWKHDISHLISEIKSRLLSLKTNITGSNSIMTANL 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00979 821 Gene3D - 458 608 IPR023299 GO:0000166
Gma05g00979 821 SFLD p-type atpase 429 730 IPR044492 -
Gma05g00979 821 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 49 807 - -
Gma05g00979 821 Gene3D - 219 345 - -
Gma05g00979 821 PRINTS P-type cation-transporting ATPase superfamily signature 447 461 - -
Gma05g00979 821 PRINTS P-type cation-transporting ATPase superfamily signature 623 633 - -
Gma05g00979 821 PRINTS P-type cation-transporting ATPase superfamily signature 600 611 - -
Gma05g00979 821 PRINTS P-type cation-transporting ATPase superfamily signature 701 713 - -
Gma05g00979 821 PRINTS P-type cation-transporting ATPase superfamily signature 291 305 - -
Gma05g00979 821 PRINTS P-type cation-transporting ATPase superfamily signature 677 696 - -
Gma05g00979 821 SUPERFAMILY Calcium ATPase, transmembrane domain M 183 762 IPR023298 -
Gma05g00979 821 CDD P-type_ATPase_HM 131 779 - -
Gma05g00979 821 Pfam E1-E2 ATPase 255 427 - -
Gma05g00979 821 SUPERFAMILY Calcium ATPase, transduction domain A 255 340 IPR008250 -
Gma05g00979 821 MobiDBLite consensus disorder prediction 63 92 - -
Gma05g00979 821 SUPERFAMILY HAD-like 445 777 IPR036412 -
Gma05g00979 821 MobiDBLite consensus disorder prediction 69 89 - -
Gma05g00979 821 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 205 471 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma05g00979 821 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 577 757 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma05g00979 821 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 181 779 IPR027256 GO:0006812|GO:0016021|GO:0019829
Gma05g00979 821 Gene3D - 440 728 IPR023214 -
Gma05g00979 821 ProSitePatterns E1-E2 ATPases phosphorylation site. 449 455 IPR018303 -
Gma05g00979 821 Pfam haloacid dehalogenase-like hydrolase 445 690 - -
Gma05g00979 821 SFLD Haloacid Dehalogenase 429 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00979 Gma-Chr5 28565868 28576625 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00979 98 802 Primary Pumps ATPases AT4G37270 77.589 0.0 1107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00979 K01534 - gmx:100776309 1482.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01540 17 15489587 15503635 Gma05g00979 05 28565868 28576625 GST