Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00975 ATGCTTCCAAAGTTCATCATTAGCCCCTTTAGGGTGGAATCCCAAGAAGGGAAGCATGTGAACAAGAGAAGAAAGCATGTGAGATCATTTGAGAGTACCAACATGGATGTTGGTTTGAGACTTCTCCCTCAAATTACAAGCTCAAATAGCACATCAAATGTCCTCTTGAAATCTGCAGTGAGAAAGGCAAACCAACAATCCATCCCTCAAGACTTATGCTTCCTTAAAACTTGCAATCTATGCAATAAGCAACTCACTCCAAACAAATATATTTACATGTACAGCAGAGATCAAGGTTTCTGCAGTGTAGAGTGTTGGAACAGACAAATAGTTTTGGATGAGATGAGAGAATTAGAGAGCTCTACCAAGAAAATGGTAGCTGCTTATAGGCAATGTTCTAGTGAGGCACGTCCAACAACAACAAAATTTGATGAGCAAAGTCAGGAAGAGGAGAAAATCAAGAGCAGATTCCATGGGGAGGAAAAGAAGTTAAGACTAATAATTGAAAATAATCACTTTTACTCCGATAAACTTGGCCAAATTGAAGAACAGATGCAGAGAAGGCCCCAAGGGGAGGAGAAGAGCTCAGGAAAGTTGATAATCAATGATTTCATGATGGATCAGATAGTAGTTAATCATCTGAGTGAGTTTGAAGAACAGATGCCAAGCACCTTCCATAGTGAAGGCATCACAACACAAAAAATTAGTGTCAACCACATGATAAGTCCCACAAAAGATCAAACAAAAGCAGATCAGCTGGTCCAGGATAAAACACAAACACAACGAAGATGCCATGACGATTTACTGGATGGGCGTCAAGGTGAAATCATTTTGGAGAATTCAAAGTCTTTTGCATGCTCTATATGCAAAAGTAGGTGTCCGAACAATGCATGGACAAAAGACTATAATTATGAAGAACTCCTAGAAGCTACAGAAGGATTTTCAATTGAGAACTCGTTATCAGAGAGAGAACATGGACCTACTATTGAAGGCTTGCTAGAGAGACAGATTGGAGATTTTGACTTTGGAAAAGTGAAACATGGACCAAAGAAATCCAGCAAAGATAAAAGTGTATGGAATTCTGGATATGCAGCACCTGAGTATGTTGAGAATGGAAAAGTATCAAATAAGACAGATGTGTACTCCTTTGGAGTGGTTCTTTTAGAGCTGATATATTATTATGCAAATGAATGTAGGATGAGCCTTAGTGCAATGATAGGGTTGCTACTAGTTGACCAGAAAGTTATGGCTTCAAATTTTGGAAACAACAAATATTCTTGA 1281 0.3864 MLPKFIISPFRVESQEGKHVNKRRKHVRSFESTNMDVGLRLLPQITSSNSTSNVLLKSAVRKANQQSIPQDLCFLKTCNLCNKQLTPNKYIYMYSRDQGFCSVECWNRQIVLDEMRELESSTKKMVAAYRQCSSEARPTTTKFDEQSQEEEKIKSRFHGEEKKLRLIIENNHFYSDKLGQIEEQMQRRPQGEEKSSGKLIINDFMMDQIVVNHLSEFEEQMPSTFHSEGITTQKISVNHMISPTKDQTKADQLVQDKTQTQRRCHDDLLDGRQGEIILENSKSFACSICKSRCPNNAWTKDYNYEELLEATEGFSIENSLSEREHGPTIEGLLERQIGDFDFGKVKHGPKKSSKDKSVWNSGYAAPEYVENGKVSNKTDVYSFGVVLLELIYYYANECRMSLSAMIGLLLVDQKVMASNFGNNKYS 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00975 426 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 337 425 - -
Gma05g00975 426 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 246 337 - -
Gma05g00975 426 Pfam zinc-finger of the FCS-type, C2-C2 70 115 IPR007650 -
Gma05g00975 426 ProSiteProfiles Zinc finger FLZ-type profile. 73 117 IPR007650 -
Gma05g00975 426 PANTHER OS01G0253100 PROTEIN 246 337 IPR045271 GO:0004714|GO:0006468
Gma05g00975 426 Gene3D Transferase(Phosphotransferase) domain 1 318 417 - -
Gma05g00975 426 PANTHER OS01G0253100 PROTEIN 337 425 IPR045271 GO:0004714|GO:0006468
Gma05g00975 426 SUPERFAMILY Protein kinase-like (PK-like) 341 396 IPR011009 -
Gma05g00975 426 Pfam Protein tyrosine and serine/threonine kinase 336 395 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00975 Gma-Chr5 28516607 28519067 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00975 341 391 Glycoside Hydrolase AT3G07070 51.852 5.01e-09 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma05g00975 PK_Tyr_Ser-Thr 5.6e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00975 - - gsj:114401847 357.836