Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00960 ATGAGTCTCCTCTTTCAAACTCTGATAATCTCATTGGTTCTTGTTAACCAATGTTGTGCTCTAAGTAGAGACGGTGTTTTGTTACTCTCTTTCAAGTACGCTGTGTTAAACGACCCACTCTACGCTCTCGCAAGCTGGAACTACAGTGACGAGACACCGTGTTCCTGGAACGGAGTTTCTTGTTCCACGGAAAACCGCGTCACATCGTTGTTTCTTCCCAATTCTCAGCTTCTAGGTTCGGTTCCTTCCGATCTGGGTTCTATTGAACATCTTCAAATTCTTGACCTTTCCAACAACTCCCTTAACGGGTCTCTTCCTTCGTCTCTCTCCCAAGCCTCCGAGCTTCGGTTCCTTAACCTCTCCAACAACCTTATCACAGGTGAGGTTCCGGAGTCCATAACTCAGCTTCGGAATCTTGAGTTTCTTAACCTCTCCGACAATGACTTGGCGGGAAAATTGCCTGAAGGCTTTTCCAACATGCAAAACCTAACTCAGGCTTCGTTCAAGAACAATTACTTGTTCGGCTTTCTTCCCAGCGGGTTAAGAACGTTGCAGGTTTTGGATCTGTCTTCAAACCTCTTGAACGGTTCTCTTCCCACGGATTTCGGCGGTGATGTCATGCGTTACTTGAACATCTCCTACAACAGATTCTCCGGCGAAATCCCGACGGAGTTCGCGGCGAGGATTCCGGGAAACGCCACCGTTGATCTCTCTTTCAACAACTTAACCGGCGAAGTTCCTGACTCCGCTGTATTCACGAATCAGAATTCGAAGTCTTTCTCTGGCAACGTTAATCTGTGTGGAGAAATGACAAAGAACCCATGTCCTATTCCTTCTTCGCCGTCGTCGGAACCGAAAGCTTCCGCTCCTATTTCTCCTCCTGCAATCGCCGCAATCCCGAAGAATTTAGACGATTCTCCGCTGGCGCCGACGGGGCAGAAACAGAGTGGTCTCAAACAAGGAACGATCATAGGAATCGTGGTGGGAGACGTCGTCGGCGTCGGAATCTTGGCCGTGCTGTTTGTCTACGTGTACCGGTTGAAGAAAAAGAAGGAGGAGGAGGGTTCAAAGACGAACAACGAAGCGGCTATAACAAGGAGCAGAAGCGAGAGTTCTTCGTCGACAACCTCGGAGTCAAGAGGCTTCACGAGATGGTCGTGTTTGAGGAAGAGAACGGAAGAGGAAGAGTCTTCGGAGACAACAAGCTCTTCCGATAGCGACTTGGAGGGTGCCGCCGCCGCAGGACAGAATAACCAGAATCTTAATAATAATCACAATAATAGTAAGGGTCCGCAACAAGAGAACAACAAAACGGGGACTCTTGTTACGGTGGACGGTGAACGACAACTCGAGCTCGAAACGCTGCTGAAGGCTTCCGCGTACATATTGGGCGCCACGGGGTCCAGCATAATGTACAAGGCCGTGCTCGAAGACGGCACGTCGTTGGCGGTTCGGAGAATTGGCGAGAGCGGCGTGGAGCGGTTCAAGGACTTCGAGAACCAGGTTCGGGTTATTGCTAAACTGGTGCACCCTAATCTGGTTCGCGTTCGGGGATTCTATTGGGGACACGATGAGAAGCTCATCATCTACGACTTCATTCCGAACGGTTGCCTCGCCAATGTTCGTTACAGGAAGTTGGGGCTATCGCCGAGTCATTTGCCGTGGGAAATCCGGCTCAAGATAGCAAAAGGGGTGGCACGTGGGCTGGCTTACCTCCACGAGAAGAAGCACGTGCATGGAAACTTGAAGCCTAGCAATATTCTGTTAGGCAACGACATGGAGCCCAAGATTGGAGACTTTGGGCTTGAGAGGATAGTGACGGGTGACACAAGCTATAAGGCTGGCGGGTCCGCGCGTATTTTTGGGAGCAAGAGATCCACAGCGTCACGAGATAGTTTCCAAGATATCACGTTTGGGCCAAGCCCAAGCCCAAGCCCGAGTTCAATAATTGGTGTGTCTCCTTACCATGCACCCGAGTCGCTCAGGAACCTCAAGCCTCACCCCAAGTGGGACGTGTACTCTTTTGGGGTCATGTTTCTTGAGCTGCTAACGGGGAAGATTGTGGTTTTGGATGATATGGGCCAAGGGCCCGGGCTTTTGGTGGAGGATAATAATCGGGCCTTGCGCATGGTTGATATGGCTATACGGGCCGACATGGAGTGTAGGGAGGAGGCCTTGTTGGCCTACTTCAAGCTAGGGTATAGTTGTATGTCTAGCGTTCCGCAAAAAAGGCCTCCAATGAAGGAGTACAGTGGAAACAACATTGTTGAGGCAGAGGCCATTGATGAGCGTGGTGACGTCATAGGAGAGGTCACGCTTGAGAAACTTCCCAAAGACGGAGAAGGAGAGAACGACCTTGTCGACATGGCAAAAGCAGTTGATGAGGATGGTGAGAGTGACGTGGCAGGGGGACCGGGGAAGGACGACAAGAGCAGCTTTGAGTTATACTATGACAGCTTCGACGGCGAGAGGTCCCGCTTGTCTGTTGCCATCCAAATTTGA 2502 0.508 MSLLFQTLIISLVLVNQCCALSRDGVLLLSFKYAVLNDPLYALASWNYSDETPCSWNGVSCSTENRVTSLFLPNSQLLGSVPSDLGSIEHLQILDLSNNSLNGSLPSSLSQASELRFLNLSNNLITGEVPESITQLRNLEFLNLSDNDLAGKLPEGFSNMQNLTQASFKNNYLFGFLPSGLRTLQVLDLSSNLLNGSLPTDFGGDVMRYLNISYNRFSGEIPTEFAARIPGNATVDLSFNNLTGEVPDSAVFTNQNSKSFSGNVNLCGEMTKNPCPIPSSPSSEPKASAPISPPAIAAIPKNLDDSPLAPTGQKQSGLKQGTIIGIVVGDVVGVGILAVLFVYVYRLKKKKEEEGSKTNNEAAITRSRSESSSSTTSESRGFTRWSCLRKRTEEEESSETTSSSDSDLEGAAAAGQNNQNLNNNHNNSKGPQQENNKTGTLVTVDGERQLELETLLKASAYILGATGSSIMYKAVLEDGTSLAVRRIGESGVERFKDFENQVRVIAKLVHPNLVRVRGFYWGHDEKLIIYDFIPNGCLANVRYRKLGLSPSHLPWEIRLKIAKGVARGLAYLHEKKHVHGNLKPSNILLGNDMEPKIGDFGLERIVTGDTSYKAGGSARIFGSKRSTASRDSFQDITFGPSPSPSPSSIIGVSPYHAPESLRNLKPHPKWDVYSFGVMFLELLTGKIVVLDDMGQGPGLLVEDNNRALRMVDMAIRADMECREEALLAYFKLGYSCMSSVPQKRPPMKEYSGNNIVEAEAIDERGDVIGEVTLEKLPKDGEGENDLVDMAKAVDEDGESDVAGGPGKDDKSSFELYYDSFDGERSRLSVAIQI 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00960 833 ProSiteProfiles Protein kinase domain profile. 457 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g00960 833 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
Gma05g00960 833 MobiDBLite consensus disorder prediction 360 383 - -
Gma05g00960 833 Pfam Leucine rich repeat 90 149 IPR001611 GO:0005515
Gma05g00960 833 Gene3D Phosphorylase Kinase; domain 1 422 532 - -
Gma05g00960 833 MobiDBLite consensus disorder prediction 275 316 - -
Gma05g00960 833 SUPERFAMILY L domain-like 23 268 - -
Gma05g00960 833 PRINTS Leucine-rich repeat signature 91 104 - -
Gma05g00960 833 PRINTS Leucine-rich repeat signature 181 194 - -
Gma05g00960 833 Gene3D Ribonuclease Inhibitor 20 180 IPR032675 -
Gma05g00960 833 Pfam Protein kinase domain 463 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g00960 833 MobiDBLite consensus disorder prediction 403 438 - -
Gma05g00960 833 SMART LRR_typ_2 88 112 IPR003591 -
Gma05g00960 833 SMART LRR_typ_2 136 159 IPR003591 -
Gma05g00960 833 SMART LRR_typ_2 181 204 IPR003591 -
Gma05g00960 833 Gene3D Ribonuclease Inhibitor 181 277 IPR032675 -
Gma05g00960 833 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 8 749 - -
Gma05g00960 833 PANTHER BNAC07G16060D PROTEIN 8 749 - -
Gma05g00960 833 SUPERFAMILY Protein kinase-like (PK-like) 462 749 IPR011009 -
Gma05g00960 833 MobiDBLite consensus disorder prediction 384 398 - -
Gma05g00960 833 Gene3D Transferase(Phosphotransferase) domain 1 534 764 - -
Gma05g00960 833 MobiDBLite consensus disorder prediction 351 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00960 Gma-Chr5 28019679 28023883 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00960 9 749 Receptor kinase-like Gene Family AT4G37250 59.001 0.0 825
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma05g00960 Pkinase 9.3e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00960 - - gmx:100776204 1348.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01548 17 15720172 15723398 Gma05g00960 05 28019679 28023883 GST