Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00951 ATGGCCGTGGACCTCATGACGACGGGTTGCAGCCGAAACGACAACATCAATAGTTTCACAACCAAAGCCGAGGAAAATGCCGTCCAAGAAGCTGCTTCCGGCTTAGAGAGCATCGAGAAGCTCATCAGACTCCTCTCGCAAACCCAAACCCAAACCCGCCATCAAATCAACAACAATAGCTCTAATGAAATCGCCATCGCCATGGACTGCAAGGTCGTCGCTGACGTGGCAGTCTCCAAGTTCAAGAAGGTCATATCCCTCCTCGGCCGAACCCGTACCGGCCACGCCAGGTTCCGACGCGCCCCTCTCCCCAACCAAAACCAACACACTCAACCTCCCTCCGAACCACCCGTGTTCCACGCTACGCCGCTGCACCAGATCCCACCACCCTCCCTTCACCAAATTCCCAAAACTGAAAGGAACCTTAACGATTCCTCCTCTTCTAAAACCATTCATTTCTCATACCCCTCCGCCGCTACCTCCTTCATCTCCTCCCTCACCGGCGACGGCGCCGCCGACAACAAACAACCGTCCTCGTCGCCGCCCGCGGCGGCGGCGACGACGACGCCCTTTCAGATCACGAGCCTCTCGCACGTGTCGTCCGCGGGGAAGCCTCCGCTTTCGACTTCCTCTTTCAAGAGAAAGTGCAGCTCTGAGAATTTAGGCTCTGGAAAATGCGGTAGCTCCTCCAGCCGCTGTCATTGTTCCAAAAAGAGGAAAATGAGGTTGAAGAGGGTAGTGAGGGTACCGGCTATAAGCTTGAAGATGGCTGATATTCCACCAGATGATTATTCTTGGAGAAAGTATGGACAGAAACCAATTAAAGGATCACCTCATCCAAGGGGTTACTACAAGTGCAGTAGTGTGAGAGGGTGTCCAGCGCGAAAACATGTGGAACGAGCTTTGGATGATCCAGCTATGCTGGTGGTAACCTACGAGGGAGAGCACAATCACACTCTCTCTGCTGCTGATGCTACTAATCTCATTCTAGAATCGTCTTGA 1002 0.5339 MAVDLMTTGCSRNDNINSFTTKAEENAVQEAASGLESIEKLIRLLSQTQTQTRHQINNNSSNEIAIAMDCKVVADVAVSKFKKVISLLGRTRTGHARFRRAPLPNQNQHTQPPSEPPVFHATPLHQIPPPSLHQIPKTERNLNDSSSSKTIHFSYPSAATSFISSLTGDGAADNKQPSSSPPAAAATTTPFQITSLSHVSSAGKPPLSTSSFKRKCSSENLGSGKCGSSSSRCHCSKKRKMRLKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPAMLVVTYEGEHNHTLSAADATNLILESS 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00951 333 PANTHER WRKY TRANSCRIPTION FACTOR 7-RELATED 19 333 - -
Gma05g00951 333 MobiDBLite consensus disorder prediction 96 149 - -
Gma05g00951 333 Pfam WRKY DNA -binding domain 262 318 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma05g00951 333 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 19 333 IPR044810 GO:0003700
Gma05g00951 333 ProSiteProfiles WRKY domain profile. 255 321 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma05g00951 333 SMART WRKY_cls 260 320 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma05g00951 333 MobiDBLite consensus disorder prediction 197 231 - -
Gma05g00951 333 Pfam Plant zinc cluster domain 213 258 IPR018872 -
Gma05g00951 333 Gene3D WRKY domain 245 321 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma05g00951 333 MobiDBLite consensus disorder prediction 197 233 - -
Gma05g00951 333 SUPERFAMILY WRKY DNA-binding domain 257 320 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00951 Gma-Chr5 27573150 27575137 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00951 24 318 WRKY Transcription Factor Family AT2G24570 43.963 3.07e-73 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma05g00951 WRKY 4.7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00951 - - gmx:100170685 617.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01555 17 15889389 15890924 Gma05g00951 05 27573150 27575137 GST
Gma05g00951 05 27573150 27575137 Gma01g01920 01 54730036 54732795 PCT
Gma05g00951 05 27573150 27575137 Gma11g00485 11 4054124 4055815 PCT