Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00942 ATGAAGAAGAGTTCTTCATCATCATTCCAGAACTTGGGATCTTTCCCAAGTCCAGGGGCACCCTATTACAGAGAGAGAAGCATTGGGAGCCAAAAGGGGTGGTGCTCAGAGAGAGTTTCAAAGCCTTCAAGTAGTTCTGGCAGCATCAGCAGAAGGCACACAATGGCAGGGTTAACACCCTTTTGTGGTGGAAGAACAATGCCATCTAAATGGGACGAAGCTGAGAGGTGGATTTGTAGCCCAGTTTCTGCCTATGCTGAGAGCAGAAGTTCGCATTCACAGCTTCAGCGAAGGCCAAAGTCAATAAGTGGCCCAATTGTGCCTCCTGGTGTGGCTGCTTTCTACTCAAATTACTCACCTGTGCTGCCACTTCGCCAGGGTTTGGTTGTGAGGAACTTGGTGGTGGGTTCGCCCTTCTCAACTGGGGTGCTGGCACCTGTTGCTGTTTCTGTTCACCACTTTGATGCACATGATGGCACTGTTTTTGGCTATGACTTGGACAGTGGAATGCAGTTTTCTAGCCCTGTTATCAATGAGAATGGCATGGTGTTTTCTCCATTGTCCACTGCTGCACCCACGTGCTCTGAACTGCCCTGTAACCAATCATCTCCTATCTCTGAAGATGAGAAGCATGACGGAACGATGGAGGGGGAAAACGTAGCATCTCATTCCTCAAGGTGTGACAAAGGTACCCAAATGAGTCCAGGAGAGATAGAGAATGATTCACATTCCTCTCCAAAATCTTGTGCCACTTCAATTGTGGATCAACAACAATGCCATTCTTCTAAATTAGAGGTCAGAGATGTGGAAGTTGACAGCCAAGCTACAATTGTCAGGTGGTCCAAGAGGCATGCAACCAAATTGGCCAAAAAAGACACTCTACACAGCAAAGATTTAAGAGAGATTAGTGCAGAAGCCCAAGCATCATGGGATATTGACGAGTCAAACATTGACACTTCCAAGTTACAGAGAGAGGAAGCCAAAATCATTGCGTGGGAGAATTTGCAGAAAGCAAAAGCTGAAACTGCAATACGGAAACTTGAGATGAAATTGGAAAAGAAGAGATCATCATCAACGGATAAAATTCTAAACAAGCTAAGAAGGGCACAGTTGAAAGCTGAGAATATGAGAAGCTCAATTCCTGTACAACAGAGCCATCAGCCACTATTCCTTGTGACCTTTCCCTATACTACTAGTTCAAGCAAGTTTGACGGCAACACAGCCTTCTACGATGGCAGATCCGTGCCTTCTCCTCAGCCTTCTCACGGCCCCATGCCTTCCTTCTATTCCTCCAAGAATCGTGATGCTCAAACCTTGCTTCCTCTGATAGTCAAGCAGATATACGGTGCGTCTCATCTTGTAGGAAGGGTGTGCATCAAAGTTGGAGGAATTACTGACATCACTTTTGTGCCTAATGATGATACTGGGAAGATTGAGTGCTTCACGGAGATGTTGAAACAGATGAAGCTGAGGGGGCATCGTAGAAGAATGGTCTGA 1497 0.4616 MKKSSSSSFQNLGSFPSPGAPYYRERSIGSQKGWCSERVSKPSSSSGSISRRHTMAGLTPFCGGRTMPSKWDEAERWICSPVSAYAESRSSHSQLQRRPKSISGPIVPPGVAAFYSNYSPVLPLRQGLVVRNLVVGSPFSTGVLAPVAVSVHHFDAHDGTVFGYDLDSGMQFSSPVINENGMVFSPLSTAAPTCSELPCNQSSPISEDEKHDGTMEGENVASHSSRCDKGTQMSPGEIENDSHSSPKSCATSIVDQQQCHSSKLEVRDVEVDSQATIVRWSKRHATKLAKKDTLHSKDLREISAEAQASWDIDESNIDTSKLQREEAKIIAWENLQKAKAETAIRKLEMKLEKKRSSSTDKILNKLRRAQLKAENMRSSIPVQQSHQPLFLVTFPYTTSSSKFDGNTAFYDGRSVPSPQPSHGPMPSFYSSKNRDAQTLLPLIVKQIYGASHLVGRVCIKVGGITDITFVPNDDTGKIECFTEMLKQMKLRGHRRRMV 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00942 498 MobiDBLite consensus disorder prediction 33 51 - -
Gma05g00942 498 MobiDBLite consensus disorder prediction 1 51 - -
Gma05g00942 498 PANTHER REMORIN FAMILY PROTEIN 4 387 - -
Gma05g00942 498 MobiDBLite consensus disorder prediction 198 254 - -
Gma05g00942 498 Coils Coil 337 357 - -
Gma05g00942 498 MobiDBLite consensus disorder prediction 1 15 - -
Gma05g00942 498 MobiDBLite consensus disorder prediction 218 254 - -
Gma05g00942 498 PANTHER OS02G0116800 PROTEIN 4 387 - -
Gma05g00942 498 Pfam Remorin, C-terminal region 307 387 IPR005516 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00942 Gma-Chr5 27008766 27015207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00942 403 495 Core DNA Replication Machinery Family AT3G02920 34.746 5.36e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00942 - - gmx:100801357 748.429