Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00937 ATGGGAAGATCCCCATGCTGCAATGAGAATGGCCTTAAGAAAGGTCCCTGGACTCCCGAAGAAGATCAAAAACTAGTCCAACATATTCAGAAACATGGCCTTAAGAAAGGTCTCAACAGATGTGGAAAAAGTTGTAGGCTAAGGTGGACTAACTATTTAAGGCCTGATATCAAGAGGGGGAAGTTTTCTCAAGAGGAGGAGCAAACAATTCTGAATCTACATTCCATCCTTGGAAACAAGACCATTGAAGTGGACAATGGATTTAAAAAATCAAAGTTGTGGAAGCCCCCTAGATACACAGACACACAGGTTGATGAAGTATTTGCTGCCAAAAAGTCCAGGTTTAAAATTGCATCTGGTAAGGAAAATGCAAAGGAATCACATTATTCTGTTTTCAAAGCTACTAGAATGTACAAAATGGAATGTGTGAAGATTAACACTCTTTGGTCTGGTGATATTGATTGTGATGGCCATGGTTTTGAGGCCAAGCTTCTTTGTCACAAGGACAAGCCAGGAATTGTGGATGTGAACATAGGTAACTTTCTCCTCCTCTGTTTCTCTCTCTGA 567 0.4056 MGRSPCCNENGLKKGPWTPEEDQKLVQHIQKHGLKKGLNRCGKSCRLRWTNYLRPDIKRGKFSQEEEQTILNLHSILGNKTIEVDNGFKKSKLWKPPRYTDTQVDEVFAAKKSRFKIASGKENAKESHYSVFKATRMYKMECVKINTLWSGDIDCDGHGFEAKLLCHKDKPGIVDVNIGNFLLLCFSL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00937 188 Pfam Myb-like DNA-binding domain 17 69 - -
Gma05g00937 188 PANTHER TRANSCRIPTION FACTOR MYB39-LIKE 1 81 - -
Gma05g00937 188 SMART sant 13 55 IPR001005 -
Gma05g00937 188 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 57 IPR017930 -
Gma05g00937 188 ProSiteProfiles Myb-like domain profile. 9 53 IPR001005 -
Gma05g00937 188 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 81 - -
Gma05g00937 188 CDD SANT 16 53 IPR001005 -
Gma05g00937 188 SUPERFAMILY Homeodomain-like 15 81 IPR009057 -
Gma05g00937 188 Gene3D - 11 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00937 Gma-Chr5 24696798 24699785 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00937 1 80 MYB Transcription Factor Family AT3G02940 76.136 1.14e-43 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma05g00937 Myb_DNA-bind_6 3.9e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00937 K09422 - gmx:113001867 328.561