Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00933 AAAATTGTGTATTTTCCATCTCTCTTTGCAGTGCATATGATAGAGCGGCTATTAAATTCCGAGGAGTGGAGGCGGACATTAACTTCAACATTGAAGATTATGAAGATGACTTGAAGCAGATGAGCAATCTTACCAAGGAAGAGTTCGTGCACGTGCTTCGCCGACAAAGCACTGGATTTCCGAGAGGGAGTTCCAAGTATCGAGGTGTCACTTTGCACAAGTGTGGAAGATGGGAGGCTCGAATGGGCCAATTTTTAGGGAAAAAGTACGTTTATTTGGGTCTCTTCGACACTGAGATCGAAGCTGCAAGGGCTTATGACAAAGCTGCCATAAAATGCAACGGCAAAGAGGCGGTAACAAATTTTGATCCCAGCATCTATGACAATGAGCTCAATTCCGCAGAATCCACAGGTAACGCTCCAGATCACAATCTGGATTTAAGTTTGGGCAATTCAACTTCAAACCCTGGCAACGATCAAGCGTTGGGGAATCAAGCCCCAAATGCTGTAACCCATGATCAGCACATGCCATCTGAGTCTAATTGGCGTAATGGGGGAATCAAGCCTAAGCTGGTGAATATACTCCCAAAACCATGTTACAGAAGCAACAACAAGGACACACATGGAAGGGATGTGCACGGGGAGAGTGAAACACTGAGGATGCTAAGTCAAACCCACCTTCATTCTCCAGCCTTCAATGAAATGCAACAAAGATATGGTCCCTACAGGTCTCCGGGAGGAGAGTCTCAAATGCTTCAAAATTTTGCGCACATTCACCCACCAAATTTTCATTTTCCCAGAAGCAGCATTGGAGGCCGAATTGGGAGTGATCTTTCATTATCAGTGGCTGATCAACAACAGTGGCAAACCGGGCCTTCACGTTATTTAGCAACTGCTGCAGCATCATCAAGTTTCCAACAAGAGATAAGACCCTCTTCTCAAGGTTGGCTGCAGAAAAATGGGCTCCACAGTCTCATGAGACCCTCATGA 989 0.456 NCVFSISLCSAYDRAAIKFRGVEADINFNIEDYEDDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAIKCNGKEAVTNFDPSIYDNELNSAESTGNAPDHNLDLSLGNSTSNPGNDQALGNQAPNAVTHDQHMPSESNWRNGGIKPKLVNILPKPCYRSNNKDTHGRDVHGESETLRMLSQTHLHSPAFNEMQQRYGPYRSPGGESQMLQNFAHIHPPNFHFPRSSIGGRIGSDLSLSVADQQQWQTGPSRYLATAAASSSFQQEIRPSSQGWLQKNGLHSLMRPS 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00933 328 MobiDBLite consensus disorder prediction 129 180 - -
Gma05g00933 328 PRINTS Ethylene responsive element binding protein signature 66 77 IPR001471 GO:0003700|GO:0006355
Gma05g00933 328 PRINTS Ethylene responsive element binding protein signature 104 124 IPR001471 GO:0003700|GO:0006355
Gma05g00933 328 MobiDBLite consensus disorder prediction 129 186 - -
Gma05g00933 328 SMART rav1_2 65 128 IPR001471 GO:0003700|GO:0006355
Gma05g00933 328 CDD AP2 64 124 IPR001471 GO:0003700|GO:0006355
Gma05g00933 328 Gene3D AP2/ERF domain 64 123 IPR036955 GO:0003700|GO:0006355
Gma05g00933 328 ProSiteProfiles AP2/ERF domain profile. 65 122 IPR001471 GO:0003700|GO:0006355
Gma05g00933 328 PANTHER AP2 DOMAIN TRANSCRIPTION FACTOR 10 326 - -
Gma05g00933 328 SUPERFAMILY DNA-binding domain 64 124 IPR016177 GO:0003677
Gma05g00933 328 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 10 326 - -
Gma05g00933 328 Pfam AP2 domain 64 113 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00933 Gma-Chr5 24511252 24513247 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00933 17 161 AP2-EREBP Transcription Factor Family AT4G36920 85.135 4.09e-84 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma05g00933 AP2 1.9e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00933 K09284 - gmx:100794096 659.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01567 17 16240278 16244669 Gma05g00933 05 24511252 24513247 GST
Gma01g01912 01 54652859 54656513 Gma05g00933 05 24511252 24513247 PCT
Gma11g00492 11 4107752 4111440 Gma05g00933 05 24511252 24513247 PCT
Gma05g00933 05 24511252 24513247 Gma01g01912 01 54652859 54656513 PCT
Gma05g00933 05 24511252 24513247 Gma11g00492 11 4107752 4111440 PCT