Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00931 ATGGAAGTGGAAGGGTCATCGAAGAAGACAATAGTGATGCAGCAGAAGGAGATAGCGGAGGCTAGGGTTCCACTGTCGTATAGGGACCAGTGTGCCCACTTGCTCATCCCTCGCAATAGGTGCAGAAACCTTACAAGGATGTTATCAAAGCAACTCAAGATTGATGGAAGCGGGCCTATGCTTGAAATTCCAGAGGATCTGTACCATTTGATTAAGAATGCAGTTTCAATTAGAAACCATCTTGAGAGGAACAAGAAGGAAAAGGACTCCAAGTTCAGGTTGATTCTTGTTGACAGCAGAATCCACCGACTTGCTCGCTACTACAACAAGACTAAGGAGCTCCCACAAGTATGGAAGTAG 360 0.4556 MEVEGSSKKTIVMQQKEIAEARVPLSYRDQCAHLLIPRNRCRNLTRMLSKQLKIDGSGPMLEIPEDLYHLIKNAVSIRNHLERNKKEKDSKFRLILVDSRIHRLARYYNKTKELPQVWK 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00931 119 Pfam NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) 13 46 IPR008698 GO:0005739
Gma05g00931 119 SMART Ribosomal_S15_2 50 119 IPR000589 GO:0003735|GO:0005840|GO:0006412
Gma05g00931 119 SUPERFAMILY S15/NS1 RNA-binding domain 63 118 IPR009068 -
Gma05g00931 119 PANTHER RIBOSOMAL PROTEIN S15P/S13E 50 119 IPR023029 -
Gma05g00931 119 PANTHER 40S RIBOSOMAL PROTEIN S13 50 119 - -
Gma05g00931 119 Pfam Ribosomal protein S15 63 112 IPR000589 GO:0003735|GO:0005840|GO:0006412
Gma05g00931 119 CDD Ribosomal_S15p_S13e 62 119 IPR000589 GO:0003735|GO:0005840|GO:0006412
Gma05g00931 119 Gene3D - 62 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00931 Gma-Chr5 24447929 24453350 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00931 13 119 Cytoplasmic Ribosomal Protein Gene Family AT4G00100 55.140 4.60e-32 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00931 K02953 - gmx:102662557 110.538