Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00928 ATGTTCTATTGTGAAAACTCTAATCTCAATGATGGCATAACCAGTGCATCAAATTCAAAGATCAGCATCCCCATAATTGACCTCACAGTCATCCATGATGATCCTATTTTGAGAGATCATGTTGTGGGAAAAGTTAGATATGCATGTGAGAAGTGGGGCTTCTTTCAGGTTATAAATCATGGAATTCCAACTCATGTTTTGGATGAGATGATCAAAGGAACTTGCAGGTTTCACCACCAAGATGCAAAGGCGAGGAAAGAGTACTACACTCGCAAAACCCTTCTGCTGATTGGAGGGATACACTTGCATTTTCCTTGGCACCTCATCCACCCGAAGCTGAAGAATTTCCTACAGTTTGTAGTTGGAAGACTTGAAGTCCTTCGCGTACATACCAAAAACATGAAGCTTTCAGATGCTGTAAATTCAGCATTCTTAACTTCCATTTCTGTTGCTGCTCTTCAATGCATCAGGGAGAAGATGGATGTCATTGATTTGGAAGATGAGAGTATTGATGCTGAAGTGCTGAATTCTATGGCAGTTTCAAATGAGCATTTCCATACTGCTCTGGGAACAAGCAATCCATTTGCTTTACGAGAAACTGTTGTTGAGGTGCCTAAGGTCAGCGGGGAGGATATTGGAGGCCTTGAGAATGTCAAGCGTGAGCTGCAAGAGACTGTTCAATATCCTGTGGAGCACCTAGAAAAATTTGAGAAGTTTGGTATGTCACCATTAAAAGGGGTTCTCTTCTATGGTCCTCCAGGATGTGGAAAAACTTTGTTGGCCAAAGCAATTGCTAATGAATGTCAAGCTAATTTCATCAGTGAGGGGCCCAGAATTGCTCACTATGTGGTTTGGTGA 858 0.4196 MFYCENSNLNDGITSASNSKISIPIIDLTVIHDDPILRDHVVGKVRYACEKWGFFQVINHGIPTHVLDEMIKGTCRFHHQDAKARKEYYTRKTLLLIGGIHLHFPWHLIHPKLKNFLQFVVGRLEVLRVHTKNMKLSDAVNSAFLTSISVAALQCIREKMDVIDLEDESIDAEVLNSMAVSNEHFHTALGTSNPFALRETVVEVPKVSGEDIGGLENVKRELQETVQYPVEHLEKFEKFGMSPLKGVLFYGPPGCGKTLLAKAIANECQANFISEGPRIAHYVVW 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00928 285 PANTHER AAA-FAMILY ATPASE 121 277 - -
Gma05g00928 285 PANTHER CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D 121 277 - -
Gma05g00928 285 Gene3D - 1 103 IPR027443 -
Gma05g00928 285 Pfam ATPase family associated with various cellular activities (AAA) 247 274 IPR003959 GO:0005524|GO:0016887
Gma05g00928 285 Pfam non-haem dioxygenase in morphine synthesis N-terminal 23 91 IPR026992 -
Gma05g00928 285 Gene3D - 204 274 IPR027417 -
Gma05g00928 285 Gene3D - 120 193 - -
Gma05g00928 285 CDD AAA 213 274 - -
Gma05g00928 285 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 205 274 IPR027417 -
Gma05g00928 285 SUPERFAMILY Clavaminate synthase-like 16 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00928 Gma-Chr5 24263974 24266435 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00928 177 279 Calmodulin-binding Proteins AT3G56690 43.269 5.29e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00928 K13525 - gmx:100805946 261.151