Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00896 ATGGAATTCTATATCCCCTTGACACATGCAAATCTCATTTCCATAATGAGACTACTATTGTGGTATGCAGATGTATGTGGATCCCAAGACGATGTTTTGTTGGCCTTCATTCTAATGTTTCATATCTATGGACTTGTGTTCTTTGGATTAGGGTTGTTGTGTGTTGGGGTTACAACAATTTCGATGCTGAAATATGACTTCGAAGCTAAGGTTGATGCCATCCAGAAGCACAAGGTGAATAACAATGGTTATCATCAAGTGGGTCCTGCAGAACCGGAATATGTGGTGCTAAGTCACCCCCTTATAGTTGATGCAGCAGTTATACTGGTTGAAGATGAAGAAACTGGACAGATACCAAGGGCATATGTGGATTCCCTCAAAGCACTTGAGGTTGATATACAACATGCCAATGCTTTGTGA 420 0.4095 MEFYIPLTHANLISIMRLLLWYADVCGSQDDVLLAFILMFHIYGLVFFGLGLLCVGVTTISMLKYDFEAKVDAIQKHKVNNNGYHQVGPAEPEYVVLSHPLIVDAAVILVEDEETGQIPRAYVDSLKALEVDIQHANAL 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00896 139 Gene3D - 5 81 - -
Gma05g00896 139 Gene3D - 82 137 IPR045851 -
Gma05g00896 139 SUPERFAMILY Acetyl-CoA synthetase-like 85 129 - -
Gma05g00896 139 PANTHER AMP-DEPENDENT SYNTHETASE AND LIGASE FAMILY PROTEIN-RELATED 7 81 - -
Gma05g00896 139 PANTHER AMP-DEPENDENT SYNTHETASE AND LIGASE FAMILY PROTEIN-RELATED 82 126 - -
Gma05g00896 139 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 81 - -
Gma05g00896 139 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 82 126 - -
Gma05g00896 139 SUPERFAMILY Acetyl-CoA synthetase-like 5 80 - -
Gma05g00896 139 Coils Coil 135 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00896 Gma-Chr5 22307822 22308912 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00896 76 123 Monolignol Biosynthesis Gene Families AT1G20480 52.083 1.04e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00896 K10526 - gmx:100783104 128.257