Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00883 ATGGATAAAGATGCTAATTCAAAAATCCAACTCCCTCCTGGATTTAGATTCCACCCTTCTGATGAGGAGCTAATTGTTCACTATCTGAGAAACAAAGTGACATCATCACCCTTTCCTACTTCATTCATAGCAGAAATAGATCTTTACAACTATAATCCATGGGAGCTCCCAAGTCTATGCAAAGCTTTGTTTAGGGAGGATGAGTGGTATTTCTTTACTCCTAGAGACAGGAAGTATCCCAATGGAGTGAGGCCTAATAGAGCAGCTGCTTCTGGTTATTGGAAGGCTATTGGGACTGACAAACCCATTTTCACTTCCTGTGGGATAAAGAGCATTGTTGTCAAGAAGGCACTCGTGTTCTACAAGGGTCGTCCACCAAAGGGATCGAAAACCGATTGGATCATGCATGAGTATAGATTGCATGATTCCACAATCTCCAATTCCAAGCAAGGAGGGTCCATGAGAGTAGGCCAATTTCATGAGTTCAATTTTTCAATTTGGTGGTTTTTAATGACCAATAGTGTAAATTATTGA 534 0.4082 MDKDANSKIQLPPGFRFHPSDEELIVHYLRNKVTSSPFPTSFIAEIDLYNYNPWELPSLCKALFREDEWYFFTPRDRKYPNGVRPNRAAASGYWKAIGTDKPIFTSCGIKSIVVKKALVFYKGRPPKGSKTDWIMHEYRLHDSTISNSKQGGSMRVGQFHEFNFSIWWFLMTNSVNY 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00883 177 Pfam No apical meristem (NAM) protein 12 140 IPR003441 GO:0003677|GO:0006355
Gma05g00883 177 PANTHER NAC TRANSCRIPTION FACTOR 56 2 156 - -
Gma05g00883 177 SUPERFAMILY NAC domain 8 146 IPR036093 GO:0003677|GO:0006355
Gma05g00883 177 Gene3D NAC domain 20 162 IPR036093 GO:0003677|GO:0006355
Gma05g00883 177 ProSiteProfiles NAC domain profile. 11 162 IPR003441 GO:0003677|GO:0006355
Gma05g00883 177 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 2 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00883 Gma-Chr5 20546967 20547644 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00883 4 158 NAC Transcription Factor Family AT1G69490 65.161 8.60e-72 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma05g00883 NAM 6.5e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00883 - - gmx:100784947 321.242