Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00873 ATGGAGATGGCTCAGGTTAAGGCACGAGCTCGAACTGCATTGGCCATGGCCGCTTCCGCAAGTTCACGGAAGAGAAGAAAAATCTCGATCAACAACAACTTCGTTCAAATCAAGAGTTTGAGCAACGCAACCGTGCCGGCGACGGGGGAACGAATCTCCGGGGAATCTCCGGCGTCTTGCTGCTCCAGCAACGGATCCGTCGACGATGAAAACCGAATCATCAAATTCTCAGATCTAGAGGTTGAGAGCACGCGAGTTGTAACGTCGACGTGCGACTGCGGTGAACAACAACAACAAATAAGGAGAGAGATGAGTCTCACGAGCGAGCTTCGAATCACGAATTCTTCTTCGCAAGAGGTGGATTCAGCGGAGGAGCAGATCACCCAAACCAAATCTTTGCCGCCGCAGAAAATGCCGACGGAGTTGGAGCTCGATGAATTCTTCGCCGCTGCTGAGAAAGATATTCGGAAACGCTTCTCAGACAAGTATAATTATGATATTGTGAAGGACGTGTCATTGGAAGGACGATACGAGTGGGTTAAATTGAAGCCATAA 555 0.4955 MEMAQVKARARTALAMAASASSRKRRKISINNNFVQIKSLSNATVPATGERISGESPASCCSSNGSVDDENRIIKFSDLEVESTRVVTSTCDCGEQQQQIRREMSLTSELRITNSSSQEVDSAEEQITQTKSLPPQKMPTELELDEFFAAAEKDIRKRFSDKYNYDIVKDVSLEGRYEWVKLKP 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00873 184 MobiDBLite consensus disorder prediction 113 138 - -
Gma05g00873 184 MobiDBLite consensus disorder prediction 113 136 - -
Gma05g00873 184 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 7 3 184 - -
Gma05g00873 184 Pfam Cyclin-dependent kinase inhibitor 138 182 IPR003175 GO:0004861|GO:0005634|GO:0051726
Gma05g00873 184 PIRSF CKI_KRP_plant 1 184 IPR044275 GO:0004861|GO:0045736|GO:0051726
Gma05g00873 184 Gene3D p27 85 184 IPR044898 -
Gma05g00873 184 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 3 184 IPR044275 GO:0004861|GO:0045736|GO:0051726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00873 Gma-Chr5 19921805 19923306 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00873 139 184 Core Cell Cycle Gene Families AT1G49620 67.391 5.87e-18 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00873 - - gmx:547744 322.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01629 17 18841343 18843085 Gma05g00873 05 19921805 19923306 GST
Gma01g01884 01 54392245 54393971 Gma05g00873 05 19921805 19923306 PCT
Gma11g00519 11 4349046 4350852 Gma05g00873 05 19921805 19923306 PCT
Gma05g00873 05 19921805 19923306 Gma01g01884 01 54392245 54393971 PCT
Gma05g00873 05 19921805 19923306 Gma11g00519 11 4349046 4350852 PCT