Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00854 atggactcctctagctCAAGCCACACTGTAGTTTACAAAACAAAAGTTGAAAGGAAAGATATTGAGCTGGTAGAGGAGGAAGAACCACGGATTGGCGCTGATTGTTCTAGTGCAACCTTTAATAAATCTGAGATTTATAAGGAGGAAGCAGGGAATGCAGCACAAAAGCATAAAGCAAAGAGGGTGGCGAGTGTCAATGTTGATGCAGAAGCCTTTGGTGATCACTGGGAAAGTTCAGTTTGCTCTATGCATTCTGAAGCTGAAGCACTAGAACATATGAAGAAAAGAGATACAGGccatcaaaGTTTCTCATTAACAGTAGCACCTAAAAACAGACAAGGACATACATTTGTTGCTAGACAACATCTTGGAGCTGATTCCTTTCTACTAAGCCGTGACCAACATCAGATGCAGGCTGCAATGGGTGCTTTCGATGGTATTATTGACACAGTTTTTGCGGTTCATCCTCTCTTACCTCTCATTGGTTTGCTCAAGTCTCATGGAAAGATTGTAATGGTGGGTGCACCAGAGAAGCCTCTGGAACTTCCAGTCTTTCCTTTACTTGCTGAGGCCTTTAAGAGGTTTGGAAAGAATCTTGAAGAGATTGAAAACAAGCTTATAGAGAAGAACAATGATGAGACATTGAGAAACCGCTATGGGCTAGCTAAAATGCCTTACACTTTGCTCTATCCTTCTAGTGATGAGGGATTGACTTTCAGAGGAATTCCAAACAGTATCTCTATCTAA 747 0.4016 MDSSSSSHTVVYKTKVERKDIELVEEEEPRIGADCSSATFNKSEIYKEEAGNAAQKHKAKRVASVNVDAEAFGDHWESSVCSMHSEAEALEHMKKRDTGHQSFSLTVAPKNRQGHTFVARQHLGADSFLLSRDQHQMQAAMGAFDGIIDTVFAVHPLLPLIGLLKSHGKIVMVGAPEKPLELPVFPLLAEAFKRFGKNLEEIENKLIEKNNDETLRNRYGLAKMPYTLLYPSSDEGLTFRGIPNSISI 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00854 248 Coils Coil 192 212 - -
Gma05g00854 248 Pfam Lipoxygenase 189 231 IPR013819 GO:0016702|GO:0046872
Gma05g00854 248 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 119 191 IPR036291 -
Gma05g00854 248 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 147 248 IPR013819 GO:0016702|GO:0046872
Gma05g00854 248 SUPERFAMILY Lipoxigenase 186 248 IPR036226 -
Gma05g00854 248 Gene3D - 118 193 - -
Gma05g00854 248 PANTHER ALDEHYDE REDUCTASE 118 189 - -
Gma05g00854 248 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 118 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00854 Gma-Chr5 18297204 18302446 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00854 119 188 Monolignol Biosynthesis Gene Families AT4G39330 61.429 1.14e-23 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00854 - K10875 gmx:100806733 146.747