Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00844 ATGGAAGACACCGCACAACAAATCAAGCGTCCTTTTGGTGTTCCTGAAGGACCAGAATTCACTGTTGGGTTGGATGTACCTTTGAGCGAGTTGAAGGTGGAGCTTCTTAAAGAAGGTGTGTCCATCATTATGCTGACTGGTTTAGGTGGATCAGGAAAAACCACTTTGGCTACAAAGCTTTGTTGGGATGAACAAGTCATAGGTAAATTCAAGGAAAATATTTTATTTGTCACCTTCTCAAAAAAGCCTAAGTTGAAGATTATTGTAGAAAGACTATTTGAACATTGTGGATATCAAGTGCCTGAGTTTCAAAGCGATGAAGATGCAGTCAATCAATTGGGACTTTTGCTGAGGAAAATTGATGCAAGTCCTATGTTGCTGGTCCTGGATGATGTCTGGCCTGGCTCAGAAGCCTTAGTTGAGAAATTTAAAGTTCAGATATCAGATTATAAAATTTTGGTGACTTCAAGAATAGCATTCCATAGATTTGGCACTCCATTCATCTTAAAACCTCTTGTTCACAATGATGCAATAACCCTTTTCCGTCACCACGCTCTCTTAGAAAAAAACAGTTCAAACATTCCCGACGAAGATCTTGTCCAAAAGGTTGTGAGACATTGCAAGGGTTTACCGCTTGCCATTAAAGTGATTGGTAGATCACTAAGTAATCGATCTTATGAGATGTGGCAAAAGATGGTGGAGGAATTTTCACATGGTCATACTATACTTGATTCTAACATTGAATTAATTACTTCCCTCCAAAAGATCTTAGATGTCTTGGAAGATAATCACATCATCAAAGAGTGCTTCATGGACTTAGCTTTATTTCCTGAAGGCCAAAGAATTCCTGTTGCTGCTCTTGTTGATATGTGGGTAGAGTTGTATGGACTAGATAATGATGGCATAGCAACGGCCATTGTCAAAAAATTAGCTTCCATGAATCTGGCTAATGTCTTAGTGACAAGGAAAAATACAAGTGATACAGACAGTTACTATTACAATAACCATTTCATCATTCTCCATGATATTTTAAGAGACTTCGCAATTTATCAAAGCAACCAGGAACAAGTTGAACAGAGAAAAAGACTGATGATTGACATAACAGAAAATAAACCTAAATGGTGGCCCAGAGAAAAACAGCAAGGCTTGATGATCCGCGTACTGTCAAATATTTTTGGATGGCGTGTTGAACAAAAACCCCAACAGATCCCTGCACGGGCATTGTCTATATCGACCGATGAAACTTGCACATCATATTGGTCCCACCTGCAACCAGTTCAAGCTGAGGTTCTGATTTTAAACTTTCAAACTAATCAGTACACCTTTCCAAAGTTCCTGAAAGAAATGAGTAAACTAAAAGTTCTGACAGTCATACATCATGGTTTCCATCCTTCTAAAATGAACAATTTTGAGTTACTTGGCTCATTATCCAACCTAAAACGAATCAGATTAGAGAGGATTTTGGTTCCTCCCTTTGTCACATTGAAGAATCTAAAAAAGTTATCCCTCTTCTTGTGTAATACAAGACAGGCTTTTGAAAATGGAAACATGCTAATTTCAGATGCTTTTCCAAATCTAGAAGATTTGAATATTGACTATTGCAAAGATCTGATAGAATTGCCTAAGGGGGTCTGTGATATCACCTCCCTGAAGATGCTCAGCATTACTAATTGCCATAAGCTTTCTGCATTGCCTCAACAATTTGGAAACTTGGAGAATTTGAAACTTCTAAGGCTAAGTTCCTGTACTGATTTGCAAGAGATACCAAATTCTATTGGAAGACTTTCGAATCTAAGACATATGGACATCTCAAACTGCATTAACCTTCCAAATTTACCAGAGGACTTTGGTAATCTTTGTAATCTAAGAAATCTGTACATGACAAGTTGTCCAAGGTGTGAATTGCCACCCTTAATCATCAATCTTGAGAATTTAAAAGAGGTGGTATGTGATGAAGAGACGGCTGCTTCATGGGAAGCTTTTAAACCTATGCTTCCCAATCTAAAGATAGATGTTCCTCAACTTGATGTTAACTTAAATTGGCTTCATGAAATTCGCTCCTAA 2064 0.3784 MEDTAQQIKRPFGVPEGPEFTVGLDVPLSELKVELLKEGVSIIMLTGLGGSGKTTLATKLCWDEQVIGKFKENILFVTFSKKPKLKIIVERLFEHCGYQVPEFQSDEDAVNQLGLLLRKIDASPMLLVLDDVWPGSEALVEKFKVQISDYKILVTSRIAFHRFGTPFILKPLVHNDAITLFRHHALLEKNSSNIPDEDLVQKVVRHCKGLPLAIKVIGRSLSNRSYEMWQKMVEEFSHGHTILDSNIELITSLQKILDVLEDNHIIKECFMDLALFPEGQRIPVAALVDMWVELYGLDNDGIATAIVKKLASMNLANVLVTRKNTSDTDSYYYNNHFIILHDILRDFAIYQSNQEQVEQRKRLMIDITENKPKWWPREKQQGLMIRVLSNIFGWRVEQKPQQIPARALSISTDETCTSYWSHLQPVQAEVLILNFQTNQYTFPKFLKEMSKLKVLTVIHHGFHPSKMNNFELLGSLSNLKRIRLERILVPPFVTLKNLKKLSLFLCNTRQAFENGNMLISDAFPNLEDLNIDYCKDLIELPKGVCDITSLKMLSITNCHKLSALPQQFGNLENLKLLRLSSCTDLQEIPNSIGRLSNLRHMDISNCINLPNLPEDFGNLCNLRNLYMTSCPRCELPPLIINLENLKEVVCDEETAASWEAFKPMLPNLKIDVPQLDVNLNWLHEIRS 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00844 687 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 19 673 IPR039203 GO:0050832
Gma05g00844 687 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 273 IPR027417 -
Gma05g00844 687 Pfam NB-ARC domain 30 240 IPR002182 GO:0043531
Gma05g00844 687 SUPERFAMILY L domain-like 429 652 - -
Gma05g00844 687 Gene3D - 172 253 IPR042197 -
Gma05g00844 687 Gene3D - 1 162 IPR027417 -
Gma05g00844 687 Gene3D - 254 351 IPR036388 -
Gma05g00844 687 PRINTS Disease resistance protein signature 42 57 - -
Gma05g00844 687 PRINTS Disease resistance protein signature 119 133 - -
Gma05g00844 687 PRINTS Disease resistance protein signature 207 221 - -
Gma05g00844 687 PRINTS Disease resistance protein signature 569 585 - -
Gma05g00844 687 Gene3D Ribonuclease Inhibitor 397 665 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00844 Gma-Chr5 17452968 17458092 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00844 523 646 Receptor kinase-like Gene Family AT1G28440 34.646 8.38e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00844 - - gmx:100793054 1372.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01667 17 20541184 20546064 Gma05g00844 05 17452968 17458092 GST
Gma01g01863 01 54167932 54172640 Gma05g00844 05 17452968 17458092 PCT
Gma11g00542 11 4521846 4526739 Gma05g00844 05 17452968 17458092 PCT
Gma05g00844 05 17452968 17458092 Gma01g01863 01 54167932 54172640 PCT
Gma05g00844 05 17452968 17458092 Gma11g00542 11 4521846 4526739 PCT