Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00841 ATGACGACCAGTTCCTCCGGTTGCGGAAGAACTAACTCGGCGAAAAAAAACCCAAATAAAAAGGAGACAGACATGAGCGATTATCTCAAAGAGAAAGGAGGTCCCAGGTTGGTTATCATGGGAGAGACCAAACAACTTGTTACCCTTTTGACACGATTTCAAGCGGCAATGAAAATGATCAAGGACATAGTGGAAAAAAGTAGATCGAGTAAAAAGAGCAAACGATTACTGAGGAAAACCCTCAAGAATATGACTCCTCTGCTGCAGGAAATCAATCAATACAATGAACACTTGGAACCACCCCGAGAAGAAATCAACACTCTTATGAAAGAAAAAGATGCAGTGGAAGAGCTTGTGTGCTATTCCTGCTCCAGGAGTATTTGGTGGACCAAATTTCTCTCTTGGCTTCCGCTCTACGGGGACGGACTTTGGCATAACAAGAATAATCCCCTTGCTGCAGATGACAACCAAGTTAAGTATATCAAAAACACACTGTATGAGGTGAAAGAGGTTCTTGAGCTTCTAGACATAGAGAATTTTCAGCAGAAACTTAAAGGTGTTGGATCACCAATCAAGTGTCCTTTTGGTGTTCCTGAAAACCCTGGATTCACTGTTGGGTTGAATCCACTGTTGAGCAAGTTGAAGATGGAGGTTCTCAGGGACGGTATGTCCACCCATTTGTTGACTGGTTTGGGTGGATCTGGTAAAACAACTTTGGCTACAAAGCTCTGTAGGGATGAAGAAGTCAAGGGTAAATTCAAGGAAAATATTTTATTTTTCACCTTCTCACAAACGCCTAAGTTGAAGAATATCATAGAAAGACTATTTGAACATTGTGGATACCACGTTCCTGAGTTTATAAGTGATGAAGATGCAATTAAACGGTTGGAAATTTTGCTGCGGAAAATTGAGGGAAGTCCACTTTTGTTGGTCTTGGATGATGTTTGGCCTGGATCAGAAGCCCTCATTGGGAAATTTCAATTCCAGATGTCTGATTATAAAATTGTGGTGACTTCTAGGGTTGCATTTCCTAAATATGGCACCCCATATGTTTTAAAACCACTTGCTCATGAAGATGCAATGACCCTATTCCGACATCATGCTCTCTTGGAAAAAAGCAGTTCACATATTCCTGACAAAGAAATTGTCCAAAAGGTTGTGAGATATTGCAAGGGTTTACCGCTTGCCGTTAAAGTGATTGGTAGATCACTCAGTCATCGGCCTATTGAGATGTGGCAAAAGATGGTGGAGGAATTGTCACAAGGTCATTCTATACTTGATTCTAATATTGAATTACTTACATGCTTCCAAAAGCTCTTGCATGTTTTGGAAGATAATCCCAACAACAAGGAGTGCTTCATGGACTTGGGGTTATTTCCTGAAGACCAAAGAATTCCTCTTCCTGTTCTTATTGATATATGGGCAGTGTTATATGGATTTGATGATGACGGCATAGAAGCAATGGACATCATAAATAAATTAGACTCCATGAATCTGGTTAATGTCTTAGTAGCAAGGAAAAATTCAAGTGACTCAGACAATTACTACTACAATAACCACTACGTCATCCTCCATGATCTTCTAAGAGAGCTTGCAATCTATCAAAACAACCTGGAACCAATTGAAAAGAGAAAAAGACTGATTAATGACATAAATGAATCCGAGGAGAAGCAACAAGGCATGATAGCCCGCTTATTGTCAAAATTTTGCAGATGCAGTGTTAAACAGACACTCCAACAGGTCCCCGCCCGCACATTGTCTATATCAGCTGATGAAACAAACACTTCATATCAGTCCCACATACAACCATCCCTAGCTGAAGTTCTGGTTTTAAATCTTCAAACTAAGAAGTATTCCTTTCCAGAGTACATAGAGAAAATGAGTGAACTAAAAGTTCTTATCATGACAAATTATGGTTTTCATCCGTGTGAACTAGACAATTTCAAACTACTCAGCTCTGTATCAAACCTGAGAAGAATCAGACTAGAGCGGATTTCTGTTCCTCACTTAGGGGCATTGAAAAATCTTGGAAAGTTATCCCTCTACATGTGTAGTAACATAAGTCAGGCTTTTGAAAATGGTACCATCACAGTTTTGGATTCATTTCCAAAACTATCAGATTTGAACATTGACTATTGCAAGGATATGGTGAAATTGCCTACTGGGATCTGTGATATTGTCTCACTAAAGAAGCTCAGTATTACTAATTGTCACAAGCTTAGTTCTCTGCCCCAAGAAATTGGACAGTTGTTGAATTTGGAACTCCTGAACATAAGTTCCTGTACTGATTTGGAAGAGATACCAGATTCTATTGTAAAACTTTCTAAGCTAAGACTTCTTGACCTCTCAAACTGCATAAGCCTTTCAAGTTTACCAGAGGACATTGGTGATCTATGTAATCTCAGGAATCTCAATATGACAAGCTGTGCAAGGTGTGAATTGCCATACTCAGTAACCAATCTTGAGAATTTGAAGGTGGTGGTATGTGATGAAGAGACAGCTGCttcatgggaagcattcgaagctatgcttccaaatctgaagttagaggttcctcgagtcgaggttaacttaaactggcttcattctattagctcctaa 2601 0.3806 MTTSSSGCGRTNSAKKNPNKKETDMSDYLKEKGGPRLVIMGETKQLVTLLTRFQAAMKMIKDIVEKSRSSKKSKRLLRKTLKNMTPLLQEINQYNEHLEPPREEINTLMKEKDAVEELVCYSCSRSIWWTKFLSWLPLYGDGLWHNKNNPLAADDNQVKYIKNTLYEVKEVLELLDIENFQQKLKGVGSPIKCPFGVPENPGFTVGLNPLLSKLKMEVLRDGMSTHLLTGLGGSGKTTLATKLCRDEEVKGKFKENILFFTFSQTPKLKNIIERLFEHCGYHVPEFISDEDAIKRLEILLRKIEGSPLLLVLDDVWPGSEALIGKFQFQMSDYKIVVTSRVAFPKYGTPYVLKPLAHEDAMTLFRHHALLEKSSSHIPDKEIVQKVVRYCKGLPLAVKVIGRSLSHRPIEMWQKMVEELSQGHSILDSNIELLTCFQKLLHVLEDNPNNKECFMDLGLFPEDQRIPLPVLIDIWAVLYGFDDDGIEAMDIINKLDSMNLVNVLVARKNSSDSDNYYYNNHYVILHDLLRELAIYQNNLEPIEKRKRLINDINESEEKQQGMIARLLSKFCRCSVKQTLQQVPARTLSISADETNTSYQSHIQPSLAEVLVLNLQTKKYSFPEYIEKMSELKVLIMTNYGFHPCELDNFKLLSSVSNLRRIRLERISVPHLGALKNLGKLSLYMCSNISQAFENGTITVLDSFPKLSDLNIDYCKDMVKLPTGICDIVSLKKLSITNCHKLSSLPQEIGQLLNLELLNISSCTDLEEIPDSIVKLSKLRLLDLSNCISLSSLPEDIGDLCNLRNLNMTSCARCELPYSVTNLENLKVVVCDEETAASWEAFEAMLPNLKLEVPRVEVNLNWLHSISS 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00841 866 Pfam NB-ARC domain 227 421 IPR002182 GO:0043531
Gma05g00841 866 Coils Coil 524 544 - -
Gma05g00841 866 Gene3D - 355 433 IPR042197 -
Gma05g00841 866 Gene3D Ribonuclease Inhibitor 531 844 IPR032675 -
Gma05g00841 866 SUPERFAMILY RNI-like 616 848 - -
Gma05g00841 866 MobiDBLite consensus disorder prediction 1 27 - -
Gma05g00841 866 Gene3D - 435 530 IPR036388 -
Gma05g00841 866 PRINTS Disease resistance protein signature 302 316 - -
Gma05g00841 866 PRINTS Disease resistance protein signature 772 788 - -
Gma05g00841 866 PRINTS Disease resistance protein signature 390 404 - -
Gma05g00841 866 PRINTS Disease resistance protein signature 225 240 - -
Gma05g00841 866 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 52 852 IPR039203 GO:0050832
Gma05g00841 866 Gene3D - 188 343 IPR027417 -
Gma05g00841 866 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 456 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00841 Gma-Chr5 17148294 17154210 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00841 230 819 WRKY Transcription Factor Family AT5G45050 23.026 3.88e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00841 - - gmx:100800632 1693.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01675 17 20737186 20742140 Gma05g00841 05 17148294 17154210 GST