Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00833 ATGATAGGGAGGCCAGGAGCGTGGGAAGAAGGAGGGGTATTACGTGGGAAGAAGGACGCAGTGACTGCGTTGTGTTTGATTGTGCGAGAAGAAGGAACGACGACTGCACGATATGCGTTGTGTTCAATGACGAAGGACAATAAGGTGAGGGCGGGGGTCATGAGGGCGCTAATGGAGTTGATGGTGGACTTGGGGTCAAGTATTTCATACTTGGTGAGCCTAGTGGTGGTGGCGGTGGCAGAGGGGAGGGTGGCGCTGGTGGAAGAAGGGGGGCTTCCAGTGCTGGTGGAGATAGTGGAGGTGGGGATGCAGAGGCAACATTCCTAA 327 0.5535 MIGRPGAWEEGGVLRGKKDAVTALCLIVREEGTTTARYALCSMTKDNKVRAGVMRALMELMVDLGSSISYLVSLVVVAVAEGRVALVEEGGLPVLVEIVEVGMQRQHS 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00833 108 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 9 107 - -
Gma05g00833 108 PANTHER U BOX DOMAIN-CONTAINING 9 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00833 Gma-Chr5 16682849 16683175 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00833 12 105 U-box Gene Family AT3G54790 40.777 1.11e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00833 - - gmx:100782449 85.8853