Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00808 atgaatgatacaaataggtggacgacaacattggacatttggtccaGCAAAATCGGTGAAGGCACTTACGACCTCATCTTCCTCGTCCGAACCGAATCCCCTGCTGTCACTCACTCCAAATTTGTTGGCATAAAAAAGTTCAAGCAATCCAAGGACGGCAACGACATCTCCCCCACCGCCATCCGCGAAATCATGTTGCTGAAGAAGATTACACATGAGAACGTCGTTAAGCTCATCAACATACACATCAACCACGTCAACATGTCTCTCTACCTCGCCTTCAATTACGTCGAGCACAATCTCTATGTCGATATATCCTTCCATCGAGAAGCATTTTTCCTTTTTGTTGAGTGTGAAATAAATTGCTATGTTAAATTTCTTAACCTTGAAGCCACTATTTCAAGGGGTAGAAGTCAAAGCTACATCAAATCCCTTTCAGGTTACATAGCATACAACTTTGTCATTGGTACTTACTCATACTGGGGGCCCAAAGCTGGCTATAATATACATCACATGACTGAAGTAGATTTGATATTTGGAGGAATTACAATTGTAAGTGGAATAGCGGGCACTTTAGCTGGAGGCTTTGTTCTGGATTATATGAGTAACACCTTATCAAATGCATTTAAGGTTGGAATTTAA 642 0.3816 MNDTNRWTTTLDIWSSKIGEGTYDLIFLVRTESPAVTHSKFVGIKKFKQSKDGNDISPTAIREIMLLKKITHENVVKLINIHINHVNMSLYLAFNYVEHNLYVDISFHREAFFLFVECEINCYVKFLNLEATISRGRSQSYIKSLSGYIAYNFVIGTYSYWGPKAGYNIHHMTEVDLIFGGITIVSGIAGTLAGGFVLDYMSNTLSNAFKVGI 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00808 213 Pfam Protein kinase domain 16 105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g00808 213 Gene3D Phosphorylase Kinase; domain 1 1 96 - -
Gma05g00808 213 PANTHER SPHINGOLIPID TRANSPORTER SPINSTER HOMOLOG 2-RELATED 139 211 - -
Gma05g00808 213 PANTHER SPINSTER 139 211 IPR044770 -
Gma05g00808 213 SUPERFAMILY Protein kinase-like (PK-like) 16 109 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00808 Gma-Chr5 15373297 15376991 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00808 17 110 Core Cell Cycle Gene Families AT5G63610 63.830 7.65e-36 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK8 Gma05g00808 Pkinase 3.8e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00808 K02208 - gmx:106798821 177.178