Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00807 ATGAATGTATTAGAAGTTGAGAATAAGGTTGATGAAAAGAAAGTGGCTGAACCTGCAGATAATGGGAATTCAAACTCAAGGCACATGCTTTTCTTGGATcaagcttcgatcaATTCCTATGATGGTAATGAGTCACGAATAGAGGAGGAACAATCAACATTTATGAAGGAGCTTGAAAACTTCTTTAGGGAGAGGAGCATGGAATTCAAACCTCCCAAATTCTACAAAGAAGGACTAAATTGCCTTAAGTTGTGGAGTGTTGTAACGAGATTAGGTGGCTATGACAAGGTGACTTCATGTAAATTATGGCGACAAGTGGGAGAGTCTTTCAAACCTCCGAAGACATGCACCACTATCTCATGGACTTTTTGGCGATTTTATAAGAAG 387 0.3773 MNVLEVENKVDEKKVAEPADNGNSNSRHMLFLDQASINSYDGNESRIEEEQSTFMKELENFFRERSMEFKPPKFYKEGLNCLKLWSVVTRLGGYDKVTSCKLWRQVGESFKPPKTCTTISWTFWRFYKK 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00807 129 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 10 129 IPR045147 GO:0006357
Gma05g00807 129 SMART bright_3 49 129 IPR001606 GO:0003677
Gma05g00807 129 Pfam ARID/BRIGHT DNA binding domain 51 128 IPR001606 GO:0003677
Gma05g00807 129 SMART ARID_2 45 127 - -
Gma05g00807 129 SUPERFAMILY ARID-like 44 129 IPR036431 GO:0003677
Gma05g00807 129 MobiDBLite consensus disorder prediction 1 28 - -
Gma05g00807 129 CDD ARID 50 129 - -
Gma05g00807 129 Gene3D - 48 129 IPR036431 GO:0003677
Gma05g00807 129 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 6-LIKE 10 129 - -
Gma05g00807 129 MobiDBLite consensus disorder prediction 1 18 - -
Gma05g00807 129 ProSiteProfiles ARID domain profile. 48 129 IPR001606 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00807 Gma-Chr5 15331577 15333783 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00807 43 129 ARID Transcription Factor Family AT1G76510 62.069 9.59e-35 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Gma05g00807 ARID 3.8e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00807 - - gmx:100791081 233.417