Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00787 ATGATGTCAAGTGACCGGATCACCCTTAAAATTGGTCCGCCTTTACTATTTTCTTTTCCCGGCGAAGTCCGCGGTTTCTATTTGGTATCTGCATTTCTCCACCAGAAGCAGCTACCTCCCCCCATTGAGGCCTCTTCCGATGAAGAGCAACGACCTTCCTCCAAGCAACACACAGAAGAAGGAGTTTCCTCTTCAGAAGAAGCTTCTTCCCAAGAAGAAGACGACGACGACCAACCTCCCACCCTTCCTCTCGCTTCCGCAAACCCCCACCCGAAACCGTCGTCCTCCGACTCCGACACCGACTTCGAGCCCACCAAAGTAAAACCCAAGCCCACGGACCAGGCCCAGAAGCCCCAGCCCTCACCCGCGCCGCCCAAATGGGGATCCAAGCGCCCTGCCCAGAACAACGCCCCTGCCACTGACCCGAAACGCGCGAAGAAGAAATTGACCAATTCTTCTTCCGCCGCTGCCGCCCACGAGACGGAGGAGAAGTCCGGTGGCGGCCAAGCGAAGTTGTCTCAGAGACTCTTCAGCAAGGAAGACGAACTCGCCATTCTTAAGGGCATGGCTGAGTTCATTTCGAAGACGGGCCAAGACCCTTACAAGTACGCCGATGCCTTCCAAAATTTCGTTAAGAATTCGCTCCGCGTGGAGGCTTCGAGCAACCAGATCAAGGAGAAGATCCGACGGCTGAAGAAGAAGTTTGAAACTAAAGCACAGAGAGCGAAGAAATGGGAGGACCCTGAGTTCTCCAAATTTCACGACCGGACTGTGTTTGAATTATCAAAGAAGGTTTGGGGAGAAGGAGCCAATGGGCTGGTGGAGAAGCCAAAACCTAATAATGGAAAAAGAAAAACTGCCAAGACTCCAAAGAAGGATGCTACTAGCAGGAATGTAGTAGCAAAATCTGAAACTACAACACTACTGGAGTCGATGGAGTTGGAGGAGTGTGGGAATGTAAATTTGCTTTACCGCGAAGTATCTGGTTTCAAAGAACTGAATGAGGATGAGATGAAGAGGGGATTGGCGTTAATTGGAGAATCTAAGAGGAAAGAGTTGGAGGGCAAGTGGAGGAAATTGCGACTTGCTGAGATGGAACTGGTTGCGAATCGCTCACTACTTATTGGGGAGCAGATTAAGTTGATATTTGAAGCACTTCAGTAA 1164 0.506 MMSSDRITLKIGPPLLFSFPGEVRGFYLVSAFLHQKQLPPPIEASSDEEQRPSSKQHTEEGVSSSEEASSQEEDDDDQPPTLPLASANPHPKPSSSDSDTDFEPTKVKPKPTDQAQKPQPSPAPPKWGSKRPAQNNAPATDPKRAKKKLTNSSSAAAAHETEEKSGGGQAKLSQRLFSKEDELAILKGMAEFISKTGQDPYKYADAFQNFVKNSLRVEASSNQIKEKIRRLKKKFETKAQRAKKWEDPEFSKFHDRTVFELSKKVWGEGANGLVEKPKPNNGKRKTAKTPKKDATSRNVVAKSETTTLLESMELEECGNVNLLYREVSGFKELNEDEMKRGLALIGESKRKELEGKWRKLRLAEMELVANRSLLIGEQIKLIFEALQ 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00787 387 Pfam Protein of unknown function, DUF573 174 267 IPR007592 GO:0006355
Gma05g00787 387 PANTHER STOREKEEPER PROTEIN 43 386 - -
Gma05g00787 387 MobiDBLite consensus disorder prediction 270 295 - -
Gma05g00787 387 MobiDBLite consensus disorder prediction 96 110 - -
Gma05g00787 387 PANTHER BNAANNG10740D PROTEIN-RELATED 43 386 IPR007592 GO:0006355
Gma05g00787 387 MobiDBLite consensus disorder prediction 278 295 - -
Gma05g00787 387 Coils Coil 221 241 - -
Gma05g00787 387 MobiDBLite consensus disorder prediction 39 173 - -
Gma05g00787 387 MobiDBLite consensus disorder prediction 48 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00787 Gma-Chr5 13667921 13669214 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00787 126 385 GeBP Transcription Factor Family AT1G61730 32.210 8.64e-29 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Gma05g00787 DUF573 6.5e-29 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00787 - - gmx:100782985 724.546