Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00779 ATGTTGTCGTGTCGCTCCGCTGCAAAAGCCCTTGTGAAGAATAGAACATCTGACATGACACTAGCCATTGGAGATGGTGCTAATGATGTCCCAATGATTCAAATGGCTGATGTTGGAGTTGGCATCAGTGGACAAGAAGGTTGGCAAGCTGTAATGGCATCTGATTTTGCAATGGGGCAGTTTAGGTTTTTAGTTCCTCTCTTATTGATACATGGTCATTGGAACTACCAACAACTTGGTTACATGATATTGTACAATTTTTACATAAATGTTGTCCTTGTTCTTATCCTATTTTGCTGCTTTTATCATACAACTTCAAATTATGCCACAAACTTCACCTTCAAAAGTTTTTCTCCACGTTATAACTCAATAATCTATAGTTCATTGCCAACTATAATTGTTGGTATTCTCAACAAGGATCTTCGTAAAAGGACTCTCCTTAAGTATCCTCAACTTTATGGGGCAGGACAGAGACATGAGGCCTACAACAAGAAATTATTTTTGTTAACAATGTTAGATACTTTGTGGCAAAGCATGGTTATCTTCTGGGCACCTCTCTTTGCATATTGGAGTAGCACAATTGATGTGGCAAGCATTGGAGACCTTTGGACTTTAGGAGTTGTTATTTTGGTTAATTTACACTTGGCCATGGATGTCATAAGGTGGTATTGGGTGACACATGTTGTCATTAGGGGGTCCATTGTTGCAACTTTCATTAGTGTCATGATCATTGATTCTATCCCCAATCTTCCTGGCTACTTGGCCTTCTTTGATGCTGCAGGAACTGGATTGTTCTGGTTATTGTTGCTTGGAATCATAGTAACAGCATTGCTTCCGTATTTGGTTGTAAAATTTGTTTATCAATACTATTTTCCTAATGATATTCAGATTTGTAGAGAAGCAGAGAAGATTGGGTATGACAGGGTTGTTGAAAGTGGACAGGTAGAAATGCTTCCTATCTCAGATAATCCATCAAGATAA 981 0.3843 MLSCRSAAKALVKNRTSDMTLAIGDGANDVPMIQMADVGVGISGQEGWQAVMASDFAMGQFRFLVPLLLIHGHWNYQQLGYMILYNFYINVVLVLILFCCFYHTTSNYATNFTFKSFSPRYNSIIYSSLPTIIVGILNKDLRKRTLLKYPQLYGAGQRHEAYNKKLFLLTMLDTLWQSMVIFWAPLFAYWSSTIDVASIGDLWTLGVVILVNLHLAMDVIRWYWVTHVVIRGSIVATFISVMIIDSIPNLPGYLAFFDAAGTGLFWLLLLGIIVTALLPYLVVKFVYQYYFPNDIQICREAEKIGYDRVVESGQVEMLPISDNPSR 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00779 326 Pfam haloacid dehalogenase-like hydrolase 13 41 - -
Gma05g00779 326 Pfam Phospholipid-translocating P-type ATPase C-terminal 51 293 IPR032630 -
Gma05g00779 326 SUPERFAMILY HAD-like 9 71 IPR036412 -
Gma05g00779 326 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9 326 - -
Gma05g00779 326 SUPERFAMILY Calcium ATPase, transmembrane domain M 9 292 IPR023298 -
Gma05g00779 326 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 15 106 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma05g00779 326 Gene3D - 4 68 IPR023214 -
Gma05g00779 326 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 9 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00779 Gma-Chr5 12428088 12430374 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00779 1 326 Primary Pumps ATPases AT5G04930 62.048 1.43e-135 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00779 K14802 - gmx:100813836 555.829