Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00743 ATGGAGACATATGGATTGCCTTATGTTCATATCATGGCTGCGTTGATGCGTCTTAACATTGATGAGTTGCCTAGTTGCTTGGTGTTGGAGAGATGGACTATAGCTGTGAAAGACCGTTTTGTTGGCATGATAATAGATGATGCTAGTTTTTGGAACTCTCATGTCATTGCTAGATATGTATGGATGCTAAATGCATGCAGGGAGTTTTGTACTTTGGCCTGTCAAAGTGCCAATGATTTTGTCGAGGGTAGAAACAAAAGTAGAAAAGAAATACAAAATTTGAAATACAAGAATGGAATAGAGGTTGGCACTGGTTGGGTGGAAAGATGTGTAGGTGGTTTGCAAGATCCTACATATGTAAGAACCAAAGGTAGTGGTTGTAAAAAATCACGTGTTTCAAAGTTGAGAATAAAGAGGATAGTCAAGTGCAGTGCCTGCAAGCTACCTGGGCACAATAAGTTGGCTTGCACAACAGTGAATAAGCCAGATGCAATAGATGACAATGTTTTAGCAAGTTGTTCTTTTGATGGAGAGGACAATGCTTCTCCAATGGCAGGGGATTTCAATGTTGATGTTATAGGAAGTCCGACGACGAGTCTCAGGAGGACGAAGAGTAAGAAGAAGACGACGACGAAGAAAACGTGCCCTTTCCCTCCAGCGCTCTCGTTGTCACCGTTGTCGTCCCCGATTCCTCCATCTCCAACAGCGGCAGCGACGCTCCAATTTCAAAGCCCACCACCACCATCGTCCTCACCGACTCATCCGATCCGAAGCGGCTTGTGGACTGACGAGGACGAGATCGAGCTCTTGCAAGGGTTCCTCTACTACACATCGCAGCAAGGATCATCGCACCACAGCGACACTGCTTTGTTCTACGACCAAATCAAGTCGAAGCTCCAACTCGATTTCAACAAGAATCAGCTCGTGGAGAAGATCCGAAGGCTGAAGAAGAAGTACCGGAACGTCCTTAACAACATTTTCTCTGGCAAGGAATTCTCCTTCAAGAGCGCTCACGATCAAGCCACCTTCGAAATCTCGCGCAAGATCTGGAGCAACGTGACTCCAGTCGGCGACAATTCATTGGACGACGACGAAATCAACCCTAATCGTAGCCCCAACCCTAACCTTAATTTTAGCCCTGTAATTCTTAAGAATGAAATGATTTTCAGGAATTCCACGGAGAAGAAAACACCGAAACGCTCTCGACCTCGATCGGCAATGAAAATCGAGCCAAATGAATTGAGTGCAAAATGA 1254 0.4537 METYGLPYVHIMAALMRLNIDELPSCLVLERWTIAVKDRFVGMIIDDASFWNSHVIARYVWMLNACREFCTLACQSANDFVEGRNKSRKEIQNLKYKNGIEVGTGWVERCVGGLQDPTYVRTKGSGCKKSRVSKLRIKRIVKCSACKLPGHNKLACTTVNKPDAIDDNVLASCSFDGEDNASPMAGDFNVDVIGSPTTSLRRTKSKKKTTTKKTCPFPPALSLSPLSSPIPPSPTAAATLQFQSPPPPSSSPTHPIRSGLWTDEDEIELLQGFLYYTSQQGSSHHSDTALFYDQIKSKLQLDFNKNQLVEKIRRLKKKYRNVLNNIFSGKEFSFKSAHDQATFEISRKIWSNVTPVGDNSLDDDEINPNRSPNPNLNFSPVILKNEMIFRNSTEKKTPKRSRPRSAMKIEPNELSAK 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00743 417 MobiDBLite consensus disorder prediction 389 407 - -
Gma05g00743 417 PANTHER BNAANNG10740D PROTEIN 195 377 - -
Gma05g00743 417 MobiDBLite consensus disorder prediction 186 258 - -
Gma05g00743 417 Coils Coil 305 325 - -
Gma05g00743 417 Pfam Protein of unknown function, DUF573 260 351 IPR007592 GO:0006355
Gma05g00743 417 PANTHER BNAANNG10740D PROTEIN-RELATED 195 377 IPR007592 GO:0006355
Gma05g00743 417 MobiDBLite consensus disorder prediction 389 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00743 Gma-Chr5 10513466 10519552 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00743 260 404 GeBP Transcription Factor Family AT5G28040 55.414 3.81e-41 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Gma05g00743 DUF573 4.5e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00743 - - gmx:100779712 297.36