Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00741 ATGGTCCTCCACCGAGATTTGAAGCCCTCTAATCTCTTAATTTCCGAATTCGACCTCCTCAAGATCGCTGATTTTGGACAGAGAGTTGCTGGTGGATTTGGGAATTTCATCATAAATAGTAGACCCATCATTCTGATTCCTTTTGATACCCTACACGGGGACATTGTTGTTTTCATTGGAAATTGGTTTACCCGCAATCATACGGATTTGAGGAAGGCTCTTGATGATGGAAAAGATCTTTCCATGCTAGATGGTGTTCTCATCAATGAGAAAGGTCCTTACCGATATAATGACACACATGTTCCTGATGATGGAAAAGGTTCATTCCTTTCTCTCAATTTAACTCTTCGCCAATGA 357 0.409 MVLHRDLKPSNLLISEFDLLKIADFGQRVAGGFGNFIINSRPIILIPFDTLHGDIVVFIGNWFTRNHTDLRKALDDGKDLSMLDGVLINEKGPYRYNDTHVPDDGKGSFLSLNLTLRQ 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00741 118 Gene3D Transferase(Phosphotransferase) domain 1 1 37 - -
Gma05g00741 118 ProSiteProfiles Protein kinase domain profile. 1 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g00741 118 SUPERFAMILY Cupredoxins 45 98 IPR008972 -
Gma05g00741 118 Coils Coil 112 118 - -
Gma05g00741 118 ProSitePatterns Serine/Threonine protein kinases active-site signature. 2 14 IPR008271 GO:0004672|GO:0006468
Gma05g00741 118 SUPERFAMILY Protein kinase-like (PK-like) 2 27 IPR011009 -
Gma05g00741 118 PANTHER MONOCOPPER OXIDASE-LIKE PROTEIN SKS1 25 102 - -
Gma05g00741 118 PANTHER MULTI-COPPER OXIDASE 25 102 IPR045087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00741 Gma-Chr5 10258592 10259963 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00741 1 27 Core Cell Cycle Gene Families AT4G28980 62.963 3.59e-06 42.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CCRK Gma05g00741 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00741 - - gmx:100788318 140.198