Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00736 ATGTATGGTGCCACCACATTGTTTGTTAAGATAATTGGAAGCATTGGAGCTGTATCTGCAGGCCTAGATTTAGGAAAAGAAGGGCCATTGGTACACATTGGAAGCTGCATTGCTTCCTTACTAGGCCAAGGAGGCCCTGACAATTACAGGATCAAGTGGCGCTGGCTACGGTATTTCAACAACGATCGTGACCGTCGCGATCTTATTACTTGTGGTGCTTCTTCAGGGGTTTGTGCAGCTTTCAGGGCACCTGTGGGAGGAGTTCTCTTTGCTCTTGAAGAGGTGGCAACTTGGTGGAGAAGTGCTCTCCTCTGGAGAACATTTTTCAGCACAGCTGTGGTGGTGGTAGTGCTAAGGGCCTCTATTGAACTTTGCCACAAAGGCAAGTGTGGTCTTTTTGGTGAAGGAGGGCTCATCATGTATGATGTGAGCGATGTCACTGTTAGGTACAATGTGATGGATATCATCCCTGTTGTTATCATTGGAGTCCTAGGTGGGGTATTGGGAAGCCTTTACAACTATCTTCTCCATAAGGTCCTCCGTGTCTACAATCTCATCAATCAGAAAGGAAAAATGTACAAGCTCCTCCTCAGTCTTTCAGTTGCAATCTTCACATCAGCGTGCCAATATGGTCTCCCATTCCTAGCAAAATGTACCCCTTGTGATCCATCCCTCTCAGATGTGTGCCCCACCAACGGGCGTTCTGGAAACTTCAAACAATTCAACTGCCCAAAAGGCTACTACAATGATCTTGCTACTCTTCTTCTGACCACCAATGATGATGCTGTTAGAAACATATTCTCAACCAACACCCCTCTTGAATACCAACCCTCCTCCATCATAATTTTCTTTGCACTGTATTGCATACTAGGACTAATCACCTTTGGGATTGCTGTGCCATCAGGGCTCTTCCTCCCCATCATTCTCATGGGTTCCGGCTACGGTCGCCTTCTCGGCATCCTCATGGGGCCTCACACAAACATTGATCAAGGGCTGTTTGCAGTCCTTGGTGCAGCCTCACTCATGGCTGGATCCATGAGAATGACTGTGTCCCTTTGTGTGATCTTCCTTGAACTAACCAACAACCTTCTCCTACTACCAATAACCATGATTGTTCTCCTCATAGCTAAAACTGTTGGAGACAGCTTCAACCCAAGCATCTATGAGATCATATTGCACCTGAAAGGCCTCCCTTTCATGGATGCAAACCCTGAGCCATGGATGAGAAACCTCACTGTGGGTGAGCTTGTTGATGTGAAGCCAGCAGTGGTTAGCTTCAAAGGAGTAGAAAAGGTGGCTAACATAGTCAATGCCTTGAAAAACACTACACATAATGGTTTTCCTGTGATGGATTGTGGGCTGGTGCCAACCACAGGAGTGGCCAATGAGGCTACAGAACTGCACGGAATCATTCTAAGAGCACACCTTATCCAAGTGCTGAAGAAGAAGTGGTTCTTGAAGGAGAGAAGGAGAACTGAGGAATGGGAAGTTAGAGAGAAATTTACATGGGTGGAGCTGGCTGAGAGAGAAGGGAATATTGAAGATGTGGCTGTGACAAAAGAAGAAATGGAGATGTTTGTTGATTTGCATCCTCTCACCAATACTACACCCTTCACAGTGCTAGAGAGTATGTCAGTTGCAAAAGCAATGGTTCTCTTCAGACAAGTAGGACTTCGCCATATGCTTGTTGTGCCAAAGTATCAAGCTTCAGGGGTATCTCCTGTGATTGGGATCCTGACCCGGCAAGATCTACTGGCATACAACATTCTGACAGTGTTTCCTCACCTGGCAAAATCAAAGAGGAAGTGA 1809 0.4632 MYGATTLFVKIIGSIGAVSAGLDLGKEGPLVHIGSCIASLLGQGGPDNYRIKWRWLRYFNNDRDRRDLITCGASSGVCAAFRAPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRASIELCHKGKCGLFGEGGLIMYDVSDVTVRYNVMDIIPVVIIGVLGGVLGSLYNYLLHKVLRVYNLINQKGKMYKLLLSLSVAIFTSACQYGLPFLAKCTPCDPSLSDVCPTNGRSGNFKQFNCPKGYYNDLATLLLTTNDDAVRNIFSTNTPLEYQPSSIIIFFALYCILGLITFGIAVPSGLFLPIILMGSGYGRLLGILMGPHTNIDQGLFAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMIVLLIAKTVGDSFNPSIYEIILHLKGLPFMDANPEPWMRNLTVGELVDVKPAVVSFKGVEKVANIVNALKNTTHNGFPVMDCGLVPTTGVANEATELHGIILRAHLIQVLKKKWFLKERRRTEEWEVREKFTWVELAEREGNIEDVAVTKEEMEMFVDLHPLTNTTPFTVLESMSVAKAMVLFRQVGLRHMLVVPKYQASGVSPVIGILTRQDLLAYNILTVFPHLAKSKRK 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00736 602 Pfam Voltage gated chloride channel 5 380 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Gma05g00736 602 PRINTS Plant CLC chloride channel signature 95 103 IPR002251 GO:0005247|GO:0006821|GO:0016020
Gma05g00736 602 PRINTS Plant CLC chloride channel signature 109 119 IPR002251 GO:0005247|GO:0006821|GO:0016020
Gma05g00736 602 PRINTS Plant CLC chloride channel signature 127 134 IPR002251 GO:0005247|GO:0006821|GO:0016020
Gma05g00736 602 PRINTS Plant CLC chloride channel signature 251 267 IPR002251 GO:0005247|GO:0006821|GO:0016020
Gma05g00736 602 CDD CBS_pair_voltage-gated_CLC_euk_bac 420 587 - -
Gma05g00736 602 Gene3D - 403 592 IPR046342 -
Gma05g00736 602 Pfam CBS domain 535 587 IPR000644 -
Gma05g00736 602 ProSiteProfiles CBS domain profile. 533 599 IPR000644 -
Gma05g00736 602 PRINTS Chloride channel signature 10 29 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Gma05g00736 602 PRINTS Chloride channel signature 74 93 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Gma05g00736 602 PRINTS Chloride channel signature 299 319 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Gma05g00736 602 PRINTS Chloride channel signature 331 347 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Gma05g00736 602 PRINTS Chloride channel signature 349 368 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Gma05g00736 602 PRINTS Chloride channel signature 387 401 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Gma05g00736 602 Gene3D Clc chloride channel 1 402 - -
Gma05g00736 602 PANTHER CHLORIDE CHANNEL PROTEIN 1 601 - -
Gma05g00736 602 SUPERFAMILY CBS-domain pair 404 587 IPR046342 -
Gma05g00736 602 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 1 601 - -
Gma05g00736 602 SMART cbs_1 422 481 IPR000644 -
Gma05g00736 602 SMART cbs_1 536 589 IPR000644 -
Gma05g00736 602 SUPERFAMILY Clc chloride channel 3 402 IPR014743 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00736 Gma-Chr5 10114345 10119355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00736 1 600 Ion Channels AT3G27170 80.333 0.0 998
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00736 K05016 - gmx:778094 1153.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00736 05 10114345 10119355 Gma19g00861 19 34256460 34260890 GST
Gma16g00515 16 5722712 5728550 Gma05g00736 05 10114345 10119355 PCT
Gma05g00736 05 10114345 10119355 Gma16g00515 16 5722712 5728550 PCT