Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00724 ATGGATGGGTGGAAGTACTTTGATAGCATCAAGACAGATTACAATATTAATCCAACAATTGAGCACTACTCTTGCATGGTAGATCTTCTTGGAAAAGTTGGGTTTCTTGATGAAGCTTTGGATTTCATTCACACTGTGCCACAAAAGGTAGATGCTAGTATTTCGGGTGTTGTTCTTGCAGCCTGCAAACTTCACAAAGACATTAAGATAGCGGAGATTGTCGCTAGGAATCTCTTAAGGTTGGAGCCATATAATTCTGCTAACTATGTGCTGATGATGAACATATATTCCACTTTTGACATATGGGGGGACGTGGAGCGCCTTAAAGAGTCAATGACTGGCTTGGGCATGAAAATCCCAAATGTTTGGAGTTGGATACAAGTTAAGCAGACTATTCATGTGTTCTCCACAGAAAGGAAATCACATCCAAAAGAAGGAGAAATATATTTTGAGTTGTATCAATTAATCTCAGAGATAAAAAAAGTTGGGAGCCCTTTGGACACACCCTCTAAACCAAACTATGAAGTCCTGAATCTAGTGAGGAAATATGAAGCTTTGTTGGAAAACATCCATCCATGGCCAAATCCTTTGCTAAGAAGTCAAAATTCGAACAAGCACTATTTTAAGAGGGGCAATAGGATACATTGTAGCAGCTCTAAGGGTTGCTCTGCGAGGAAGCAACTTGAGAGGAGCAAGAATGATCCAAACATGTTGGTTATCACATACACATCAGAGCACAACCATTCATGGCCAACTCAAAGAAATGCTCTACCTGGTTCAACAACATCACAGTCATCCAAGCACAACAACAATGTTGTTTCCAATTCAAAGAATTCAGAAGGCTGA 846 0.3995 MDGWKYFDSIKTDYNINPTIEHYSCMVDLLGKVGFLDEALDFIHTVPQKVDASISGVVLAACKLHKDIKIAEIVARNLLRLEPYNSANYVLMMNIYSTFDIWGDVERLKESMTGLGMKIPNVWSWIQVKQTIHVFSTERKSHPKEGEIYFELYQLISEIKKVGSPLDTPSKPNYEVLNLVRKYEALLENIHPWPNPLLRSQNSNKHYFKRGNRIHCSSSKGCSARKQLERSKNDPNMLVITYTSEHNHSWPTQRNALPGSTTSQSSKHNNNVVSNSKNSEG 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00724 281 Pfam E motif 65 127 IPR046848 -
Gma05g00724 281 ProSiteProfiles WRKY domain profile. 181 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma05g00724 281 Gene3D WRKY domain 181 252 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma05g00724 281 SUPERFAMILY WRKY DNA-binding domain 215 251 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma05g00724 281 Pfam WRKY DNA -binding domain 215 248 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma05g00724 281 SMART WRKY_cls 181 250 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma05g00724 281 PANTHER OS05G0586900 PROTEIN 2 160 - -
Gma05g00724 281 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 2 160 - -
Gma05g00724 281 Gene3D Tetratricopeptide repeat domain 1 145 IPR011990 GO:0005515
Gma05g00724 281 MobiDBLite consensus disorder prediction 245 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00724 Gma-Chr5 9758571 9760653 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00724 2 168 Glycoside Hydrolase AT3G49170 36.527 7.33e-35 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma05g00724 WRKY 2.4e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00724 - - gmx:100801069 311.227