Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00719 ATGAAGACTTTCTCCTCAATTCAGCCACCCCACCATTTTCGTTGCACAAGATTTTTCTCAAACACTACCACAAGGGCTCAACTTCCCTTTCCTGCAAAGGTCTTCTTTTGCCAGGCAAAATCTGACCTTCATGGTGGTGTTTTTTACTCAGGCATAGATGGATCGTTGAATTTAAAAGTGGTGTCTCCCACTCTATTAGTAGCAGAAAAGGAAGAAGCCAAGGCTGTGTTGACCTTGTTTTTGAAGAAACAAGGTTTGAGCAATGCAATTGCTGCTAGAACCAGCAAGAAGTCAGATCATTTTATTGATCACCTTGTCTCAAGGCTTCACTCTAAACACAAATCTTGGTATCTCGCAGGGAGAGAGCTTACAACTCTAGAGATCAGGGATGCACTTATCCCTTATCTTGAATCTCTTTTTGAAGAGCATGGAGACATCCTAGTGGATGTAGTGGAAAACTATCCAAATCCTCCTGGTAAGGATAAATCGGCTGTGCTGGTTCCTCCTTCTAATCCAGTGTTAGACTCTAAGAAGCTTAAAGCTGTGTCTCGAGTGAGTGAGACAGACCCCGATGGTGGAAATCTTCGCCCTCATATTGTCTATCTCATGGAACTTGGTATGGATATTGAGCAGATTAGGAGTATCACACGACGATTCCCATCTTTTGCCTACTATAGCTTGGAGGGTAAAATTAAGCCAGTGGTTGAGTTTTTTCTTGAACTTGGAGTGCCAAAAGAGAACATTCCCACTATCCTCACTAAAAGACCTCAATTATGTGGAATCAGTCTATCTGAAAATCTTAAACCCACCATGAAGTTTTTCGAATCTTTGGGTGTTGACAAAAACCAATGGCCAAAGGTGATCTATCGCTTCCCAGCACTGCTAACTTATAGCAGGCCAAAAGTGATGGAAAGCATAGATTTTCTCCTTGAATTAGGCCTCTCAGAAGAGGGTATAGGTAAGATTTTAACTCGCTGCCCCAATATTGTTAGTTACAGTGTAGAGGACAATCTCCGACCCACAGCTAAGTACTTCCGTTCTTTGGGGGTTGATGTTGGCATTCTTCTCTTCAGATGCCCACAGAATTTTGGTCTTAGCATTGAGACCAACCTAAAGCCTGTAACAGAATTTTTCTTGGAGAGGGGATACACTTTGGAAGAAATTGGGACCATGATTTCAAGATATGGAGCCTTGTATACATTCAGCTTGACTGAAAATTTGATACCAAAATGGGATTTCTTCTTGACCACAGGTTACCCAAAATCTGAGTTGGTTAAGTTCCCACAATATTTTGGGTACAATTTAGAGGAAAGGATTAAACCTAGATTTGAAATTATGACAAAATCTGGAGTGAAGTTACTGCTGAACCAGGTTCTTTCACTGTCAAGCAGCAACTTTGATGAAGCCTTGAAAAAGAAAATGAAGAAAATGCAAGTGAGTTAG 1443 0.4109 MKTFSSIQPPHHFRCTRFFSNTTTRAQLPFPAKVFFCQAKSDLHGGVFYSGIDGSLNLKVVSPTLLVAEKEEAKAVLTLFLKKQGLSNAIAARTSKKSDHFIDHLVSRLHSKHKSWYLAGRELTTLEIRDALIPYLESLFEEHGDILVDVVENYPNPPGKDKSAVLVPPSNPVLDSKKLKAVSRVSETDPDGGNLRPHIVYLMELGMDIEQIRSITRRFPSFAYYSLEGKIKPVVEFFLELGVPKENIPTILTKRPQLCGISLSENLKPTMKFFESLGVDKNQWPKVIYRFPALLTYSRPKVMESIDFLLELGLSEEGIGKILTRCPNIVSYSVEDNLRPTAKYFRSLGVDVGILLFRCPQNFGLSIETNLKPVTEFFLERGYTLEEIGTMISRYGALYTFSLTENLIPKWDFFLTTGYPKSELVKFPQYFGYNLEERIKPRFEIMTKSGVKLLLNQVLSLSSSNFDEALKKKMKKMQVS 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00719 480 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF5, CHLOROPLASTIC 23 478 - -
Gma05g00719 480 PANTHER CGI-12 PROTEIN-RELATED 23 478 IPR003690 GO:0003690|GO:0006355
Gma05g00719 480 Pfam mTERF 357 466 IPR003690 GO:0003690|GO:0006355
Gma05g00719 480 Pfam mTERF 199 380 IPR003690 GO:0003690|GO:0006355
Gma05g00719 480 Gene3D Transcription termination factor 3, mitochondrial 257 476 IPR038538 -
Gma05g00719 480 SMART mt_12 213 244 IPR003690 GO:0003690|GO:0006355
Gma05g00719 480 SMART mt_12 320 351 IPR003690 GO:0003690|GO:0006355
Gma05g00719 480 SMART mt_12 176 208 IPR003690 GO:0003690|GO:0006355
Gma05g00719 480 SMART mt_12 353 384 IPR003690 GO:0003690|GO:0006355
Gma05g00719 480 SMART mt_12 389 420 IPR003690 GO:0003690|GO:0006355
Gma05g00719 480 SMART mt_12 249 280 IPR003690 GO:0003690|GO:0006355
Gma05g00719 480 SMART mt_12 421 452 IPR003690 GO:0003690|GO:0006355
Gma05g00719 480 SMART mt_12 285 315 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00719 Gma-Chr5 9544339 9547752 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gma05g00719 mTERF 1.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00719 K15032 K12177 gmx:100781900 945.266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00719 05 9544339 9547752 Gma19g00706 19 29430573 29433806 GST