Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00717 ATGGAGCAGAGAAAAAGCATATGGTCTCCCGTCACAGATCCAAGAAGTGGTTTCAACCGGGAATCCAGAACTTTCCACAGCCTCAAGCCCCCTCTCCGTCTCCCTCCCCCCAACGCCGCCGTCTCCGCAGCCGCCTTCGCCCTCTTCCTCCGCCGCAACTCGCAGTTCCCGGACTCCTCCACCGCCTTTATCGACTCTGCCACCGGCCACCGCCTCTCCTACGGCGAGCTCCTCCACCGCGCCAAAACCCTAGCCTCGAATCTCGCCACAATCCTCAAACTCACCAAAGGCGACACAGCGCTCGTTCTCTCACCAAATATTCTCCAAGTTCCGATCCTCTGCTTCGCGCTTCTTTCTCTCGGCGTGGTCGTCTCCCCCGCGAACCCTCTCTCCACGCGCTCCGAGCTCACGCGCTTCTTCAACATCAGCAACCCCTCAATTGTCTTCACAGTAACCTCCGTCGTTGAAAAAACACGCGAGTTTCAAGTGAAAACCGTGCTCCTGGACTCTCCCGAGTTCGACACGCTCACGAAGTCTCAGATTCACACAAAATACATCCAAGAGGGACTCGTGTCAAACATGCAAGTGACTCAGTCCGACGTGGCAGCGATTCTATACTCCTCGGGAACCACGGGAACGATAAAGGGTGTGATGCTCACGCACCGTAACTTAACCGCGATCGCCGCGGGATACGATACCGTTCGGGAGAAGCGGAAGGAGCCAGCGGTGGTGCTCTATACGGTGCCGTTTTTCCACGTGTACGGGTTCACGTTCAGCTTGGGGGCGATGGTGCTGTCGGAGACGGTGGTGATCATGGAGAGGTTCAGCATGAAGGCGATGCTGAGCGCCGTGGAGAGGTTCCGGGTGACGCACGCTACGATGGTGCCGGCGCTGGTGGTGGCTATGACGAAAGACTGCGTCATCGCCGGCTACGATTTGACGTCGCTGGAAGGGATCGTTTGCGGCGGATCTCCGCTGAGGAAAGAAACCGATGAGGCATTCAAAGCTAAGTTCCCCAACGTCCTCGTCATGCAGGGATACGGTTTAACTGAGTCTGCAGTTACCCGAACCACTCCAGAGGAGGCAAATCAGGTGGGAGCAACAGGTAAACTGATACCAAATATAGAAGCCAAAATTGTGAACCCAGAAACAGGGGAAGCCATGTTTCCCGGTGAACAAGGAGAACTCTGGATCAGAGGACCTTATGTTATGAAAGGTTATTCTGGTGACCCAAAAGCAACTTCAGCAACTTTGGTGGATGGGTGGTTAAGGACTGGGGACCTCTGTTATTTTGATAGCAAAGGTTTCTTGTATGTTGTAGATAGGTTGAAAGAGTTGATTAAATACAAGGGCTACCAGGTTGCTCCGGCAGAGCTAGAAGAGTTACTCCTATCTCATTCAGAGATAAATGATGCTGCAGTTATTCCATACCCTGATGAAGTAGCAGGCCAAGTGCCCATGGCGTTTGTGGTGAGACAACCTCAAAGTTCCCTTGGCGCAGCAGAAGTTATTGATTTTGTTGCCAAACAGGTTTCACCGTACAAGAAAATAAGGCGTGTAGCATTTGTTAATTCCATACCCAAGAATGCTGCGGGAAAGATACTGAGGAAGGACTTAAAACTGGCGCTCTCTAGGTTGTAA 1641 0.5283 MEQRKSIWSPVTDPRSGFNRESRTFHSLKPPLRLPPPNAAVSAAAFALFLRRNSQFPDSSTAFIDSATGHRLSYGELLHRAKTLASNLATILKLTKGDTALVLSPNILQVPILCFALLSLGVVVSPANPLSTRSELTRFFNISNPSIVFTVTSVVEKTREFQVKTVLLDSPEFDTLTKSQIHTKYIQEGLVSNMQVTQSDVAAILYSSGTTGTIKGVMLTHRNLTAIAAGYDTVREKRKEPAVVLYTVPFFHVYGFTFSLGAMVLSETVVIMERFSMKAMLSAVERFRVTHATMVPALVVAMTKDCVIAGYDLTSLEGIVCGGSPLRKETDEAFKAKFPNVLVMQGYGLTESAVTRTTPEEANQVGATGKLIPNIEAKIVNPETGEAMFPGEQGELWIRGPYVMKGYSGDPKATSATLVDGWLRTGDLCYFDSKGFLYVVDRLKELIKYKGYQVAPAELEELLLSHSEINDAAVIPYPDEVAGQVPMAFVVRQPQSSLGAAEVIDFVAKQVSPYKKIRRVAFVNSIPKNAAGKILRKDLKLALSRL 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00717 546 Pfam AMP-binding enzyme 51 449 IPR000873 -
Gma05g00717 546 Gene3D - 445 544 IPR045851 -
Gma05g00717 546 MobiDBLite consensus disorder prediction 1 20 - -
Gma05g00717 546 ProSitePatterns Putative AMP-binding domain signature. 204 215 IPR020845 -
Gma05g00717 546 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 13 543 - -
Gma05g00717 546 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 13 543 - -
Gma05g00717 546 Pfam AMP-binding enzyme C-terminal domain 458 533 IPR025110 -
Gma05g00717 546 SUPERFAMILY Acetyl-CoA synthetase-like 44 540 - -
Gma05g00717 546 CDD 4CL 53 539 - -
Gma05g00717 546 Gene3D - 34 444 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00717 Gma-Chr5 9351338 9369260 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00717 9 539 Monolignol Biosynthesis Gene Families AT5G63380 49.088 1.72e-179 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00717 - - gmx:100784234 1029.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00717 05 9351338 9369260 Gma19g00713 19 29613512 29638768 GST