Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00710 ATGGGGGATTCACAAGAAAATAACAAAGGAAAGAGTAGAGACAAAGATAATTATGTATCTTGGACTATGGAGGATACCAATGAGTTGTTGCACCTCTTGGTGGATGCTATGAATAGGGGATTGCGTGATGCCAATGGGTCACTTAGCAAACAAAATGTAGAACGAATAATACTTCCTCAACTCAATGCAAAAACTAAATTCCCTAAAACTTATAGTCATTATTTGAGTCGGATGAAGTGGTTTCGAAACCAGTATAACATGATGTCAACCCTTATGCGCAACAACTCTGGCTTTGGATGGGACCCAATTGGAAAAACTTTCACTGCTCATGAGGATGTATGGAAAGATTACTTAAAGCCAATCAGGTTTACTAGTGAGCAGCTCAGGATTGCAACTGATAACTACTCATCATTATTGGGATCAGGAGGTTATGGCGAAGTTTATAAAGGAAATTTGACTAATGGAATCACTGTGGCTGTAAAGGTTCTACGTGGAAACTCTGATAAGAGAATTGAGGAACAGTTTAAGGCAGAAGTGGGTACAATTGGAAAAGTTCATCATTTCAATCTAGTTCAATTGTATGGATTTTGCTTTGAAAGAGACCTCAGGGCACTGGTTTATGAGTACATGGAGAATGGCTCTCTTGACAGGTATTTGTTCCATGAAAAGAAGACCTTAGGATATGAAAAGCTTTATGAGATTGCAGTTGGGACAGCCAGAGGCATAGCATACTTGCATGAAGATTGCAAACAAAGAATAATCCATTATGACATCAAACCAGGAAATATTCTATTGGACAGCAATTTCAATCCTAAAGTTGCTGATTTTGGATTAGCCAAGCTTTGCAACAGGGACAATACTCATACTACCATTACAGGAGGTAGGGGCACTCCTGGTTATGCTGCACCTGAGCTTTGGATGCCATTTCCTGTAACTCACAAGTGTGATGTTTACAGCTTTGGAATGCTGTTATTCGAAATCATAGGTAGGAGAAGAAACCTTGGCATTAACCTTCCAGAAAGCCAGGAGTGGTTTCCATTATGGGTTTGGAAAAGATTTGAAGCTGGAGAATTTGCAGAGTTAGTAATAGCTTGTGGAATAGAGAAGAGACATCAGGAAATGGCTGAAAGAATGGTTAAGGTAGCTTTGTTATGA 1155 0.3931 MGDSQENNKGKSRDKDNYVSWTMEDTNELLHLLVDAMNRGLRDANGSLSKQNVERIILPQLNAKTKFPKTYSHYLSRMKWFRNQYNMMSTLMRNNSGFGWDPIGKTFTAHEDVWKDYLKPIRFTSEQLRIATDNYSSLLGSGGYGEVYKGNLTNGITVAVKVLRGNSDKRIEEQFKAEVGTIGKVHHFNLVQLYGFCFERDLRALVYEYMENGSLDRYLFHEKKTLGYEKLYEIAVGTARGIAYLHEDCKQRIIHYDIKPGNILLDSNFNPKVADFGLAKLCNRDNTHTTITGGRGTPGYAAPELWMPFPVTHKCDVYSFGMLLFEIIGRRRNLGINLPESQEWFPLWVWKRFEAGEFAELVIACGIEKRHQEMAERMVKVALL 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00710 384 SMART serkin_6 133 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g00710 384 Pfam Protein tyrosine and serine/threonine kinase 137 328 IPR001245 GO:0004672|GO:0006468
Gma05g00710 384 PANTHER PUTATIVE-RELATED 118 383 - -
Gma05g00710 384 ProSiteProfiles Protein kinase domain profile. 133 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g00710 384 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Gma05g00710 384 ProSitePatterns Protein kinases ATP-binding region signature. 139 161 IPR017441 GO:0005524
Gma05g00710 384 SUPERFAMILY Protein kinase-like (PK-like) 114 365 IPR011009 -
Gma05g00710 384 Gene3D Phosphorylase Kinase; domain 1 107 209 - -
Gma05g00710 384 Gene3D Transferase(Phosphotransferase) domain 1 210 384 - -
Gma05g00710 384 Pfam Myb/SANT-like DNA-binding domain 20 117 IPR024752 -
Gma05g00710 384 PANTHER RUST RESISTANCE KINASE LR10-RELATED 118 383 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00710 Gma-Chr5 8934874 8938506 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00710 123 383 Receptor kinase-like Gene Family AT5G39030 46.067 1.54e-68 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Gma05g00710 PK_Tyr_Ser-Thr 1.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00710 - - gmx:100776445 506.138